Protein–RNA interactions for Protein: Q8WV48

CCDC107, Coiled-coil domain-containing protein 107, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107Q8WV48 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC13.36□□□□□ -0.27
CCDC107Q8WV48 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC13.36□□□□□ -0.27
CCDC107Q8WV48 AC079140.1-201ENST00000508039 487 ntBASIC13.36□□□□□ -0.27
CCDC107Q8WV48 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC13.36□□□□□ -0.27
CCDC107Q8WV48 KRT18P58-201ENST00000527480 1120 ntBASIC13.36□□□□□ -0.27
CCDC107Q8WV48 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC13.36□□□□□ -0.27
CCDC107Q8WV48 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC13.36□□□□□ -0.27
CCDC107Q8WV48 RNF34-208ENST00000555076 593 ntTSL 3 BASIC13.36□□□□□ -0.27
CCDC107Q8WV48 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
CCDC107Q8WV48 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
CCDC107Q8WV48 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CCDC107Q8WV48 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CCDC107Q8WV48 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC13.36□□□□□ -0.27
CCDC107Q8WV48 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CCDC107Q8WV48 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC13.36□□□□□ -0.27
CCDC107Q8WV48 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
CCDC107Q8WV48 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
CCDC107Q8WV48 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CCDC107Q8WV48 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CCDC107Q8WV48 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
CCDC107Q8WV48 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC13.36□□□□□ -0.27
CCDC107Q8WV48 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CCDC107Q8WV48 REXO1L1P-202ENST00000608646 1974 ntBASIC13.36□□□□□ -0.27
CCDC107Q8WV48 SLC9A8-201ENST00000361573 6094 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CCDC107Q8WV48 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CCDC107Q8WV48 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CCDC107Q8WV48 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC13.36□□□□□ -0.27
CCDC107Q8WV48 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
CCDC107Q8WV48 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
CCDC107Q8WV48 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC13.35□□□□□ -0.27
CCDC107Q8WV48 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CCDC107Q8WV48 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
CCDC107Q8WV48 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
CCDC107Q8WV48 PIK3R3-203ENST00000420542 5174 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CCDC107Q8WV48 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CCDC107Q8WV48 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
CCDC107Q8WV48 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
CCDC107Q8WV48 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC13.35□□□□□ -0.27
CCDC107Q8WV48 BX640514.1-201ENST00000583223 1918 ntBASIC13.35□□□□□ -0.27
CCDC107Q8WV48 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CCDC107Q8WV48 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CCDC107Q8WV48 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CCDC107Q8WV48 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
CCDC107Q8WV48 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CCDC107Q8WV48 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CCDC107Q8WV48 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CCDC107Q8WV48 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC13.35□□□□□ -0.27
CCDC107Q8WV48 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
CCDC107Q8WV48 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC13.35□□□□□ -0.27
CCDC107Q8WV48 ARHGEF17-201ENST00000263674 7853 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CCDC107Q8WV48 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
CCDC107Q8WV48 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CCDC107Q8WV48 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CCDC107Q8WV48 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CCDC107Q8WV48 CD82-202ENST00000342935 967 ntTSL 5 BASIC13.35□□□□□ -0.27
CCDC107Q8WV48 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CCDC107Q8WV48 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
CCDC107Q8WV48 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CCDC107Q8WV48 MIR574-201ENST00000385209 96 ntBASIC13.35□□□□□ -0.27
CCDC107Q8WV48 AL022342.1-201ENST00000400363 863 ntBASIC13.35□□□□□ -0.27
CCDC107Q8WV48 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC13.35□□□□□ -0.27
CCDC107Q8WV48 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC13.35□□□□□ -0.27
CCDC107Q8WV48 AC142381.1-201ENST00000426099 345 ntBASIC13.35□□□□□ -0.27
CCDC107Q8WV48 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC13.35□□□□□ -0.27
CCDC107Q8WV48 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
CCDC107Q8WV48 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
CCDC107Q8WV48 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CCDC107Q8WV48 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC13.35□□□□□ -0.27
CCDC107Q8WV48 AP000842.3-202ENST00000569238 1080 ntBASIC13.35□□□□□ -0.27
CCDC107Q8WV48 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC13.35□□□□□ -0.27
CCDC107Q8WV48 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC13.35□□□□□ -0.27
CCDC107Q8WV48 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC13.35□□□□□ -0.27
CCDC107Q8WV48 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
CCDC107Q8WV48 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC13.35□□□□□ -0.27
CCDC107Q8WV48 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
CCDC107Q8WV48 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CCDC107Q8WV48 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
CCDC107Q8WV48 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CCDC107Q8WV48 AC015656.1-201ENST00000624209 3578 ntBASIC13.35□□□□□ -0.27
CCDC107Q8WV48 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CCDC107Q8WV48 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
CCDC107Q8WV48 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CCDC107Q8WV48 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CCDC107Q8WV48 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
CCDC107Q8WV48 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CCDC107Q8WV48 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CCDC107Q8WV48 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC13.35□□□□□ -0.27
CCDC107Q8WV48 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC13.35□□□□□ -0.27
CCDC107Q8WV48 AC010327.5-201ENST00000586923 3061 ntBASIC13.35□□□□□ -0.27
CCDC107Q8WV48 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC13.35□□□□□ -0.27
CCDC107Q8WV48 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC13.35□□□□□ -0.27
CCDC107Q8WV48 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CCDC107Q8WV48 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
CCDC107Q8WV48 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CCDC107Q8WV48 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CCDC107Q8WV48 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC13.34□□□□□ -0.27
CCDC107Q8WV48 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
CCDC107Q8WV48 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CCDC107Q8WV48 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CCDC107Q8WV48 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 69.1 ms