Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TRIM48Q8IWZ4 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
TRIM48Q8IWZ4 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRIM48Q8IWZ4 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRIM48Q8IWZ4 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
TRIM48Q8IWZ4 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRIM48Q8IWZ4 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRIM48Q8IWZ4 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC15.11■□□□□ 0.01
TRIM48Q8IWZ4 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TRIM48Q8IWZ4 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRIM48Q8IWZ4 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRIM48Q8IWZ4 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRIM48Q8IWZ4 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
TRIM48Q8IWZ4 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TRIM48Q8IWZ4 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
TRIM48Q8IWZ4 POLL-217ENST00000628479 1953 ntTSL 5 BASIC15.11■□□□□ 0.01
TRIM48Q8IWZ4 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
TRIM48Q8IWZ4 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRIM48Q8IWZ4 DRD5P1-201ENST00000456605 1438 ntBASIC15.11■□□□□ 0.01
TRIM48Q8IWZ4 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
TRIM48Q8IWZ4 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
TRIM48Q8IWZ4 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRIM48Q8IWZ4 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TRIM48Q8IWZ4 MDH2-205ENST00000461263 648 ntTSL 2 BASIC15.11■□□□□ 0.01
TRIM48Q8IWZ4 AP001582.1-201ENST00000525856 295 ntBASIC15.11■□□□□ 0.01
TRIM48Q8IWZ4 HILS1-202ENST00000545329 423 ntBASIC15.11■□□□□ 0.01
TRIM48Q8IWZ4 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC15.11■□□□□ 0.01
TRIM48Q8IWZ4 MIR5189-201ENST00000577370 114 ntBASIC15.11■□□□□ 0.01
TRIM48Q8IWZ4 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC15.11■□□□□ 0.01
TRIM48Q8IWZ4 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC15.11■□□□□ 0.01
TRIM48Q8IWZ4 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC15.11■□□□□ 0.01
TRIM48Q8IWZ4 TBCB-211ENST00000589996 724 ntTSL 3 BASIC15.11■□□□□ 0.01
TRIM48Q8IWZ4 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC15.11■□□□□ 0.01
TRIM48Q8IWZ4 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRIM48Q8IWZ4 GPR39-203ENST00000622084 900 ntTSL 5 BASIC15.11■□□□□ 0.01
TRIM48Q8IWZ4 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC15.11■□□□□ 0.01
TRIM48Q8IWZ4 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TRIM48Q8IWZ4 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRIM48Q8IWZ4 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRIM48Q8IWZ4 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRIM48Q8IWZ4 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRIM48Q8IWZ4 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TRIM48Q8IWZ4 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRIM48Q8IWZ4 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC15.11■□□□□ 0.01
TRIM48Q8IWZ4 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC15.11■□□□□ 0.01
TRIM48Q8IWZ4 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TRIM48Q8IWZ4 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRIM48Q8IWZ4 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRIM48Q8IWZ4 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
TRIM48Q8IWZ4 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
TRIM48Q8IWZ4 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRIM48Q8IWZ4 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
TRIM48Q8IWZ4 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
TRIM48Q8IWZ4 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
TRIM48Q8IWZ4 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC15.11■□□□□ 0.01
TRIM48Q8IWZ4 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC15.11■□□□□ 0.01
TRIM48Q8IWZ4 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC15.11■□□□□ 0.01
TRIM48Q8IWZ4 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC15.1■□□□□ 0.01
TRIM48Q8IWZ4 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRIM48Q8IWZ4 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC15.1■□□□□ 0.01
TRIM48Q8IWZ4 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRIM48Q8IWZ4 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TRIM48Q8IWZ4 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TRIM48Q8IWZ4 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TRIM48Q8IWZ4 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRIM48Q8IWZ4 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRIM48Q8IWZ4 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TRIM48Q8IWZ4 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRIM48Q8IWZ4 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRIM48Q8IWZ4 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC15.1■□□□□ 0.01
TRIM48Q8IWZ4 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRIM48Q8IWZ4 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC15.1■□□□□ 0.01
TRIM48Q8IWZ4 AP005117.1-202ENST00000581724 1908 ntBASIC15.1■□□□□ 0.01
TRIM48Q8IWZ4 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRIM48Q8IWZ4 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC15.1■□□□□ 0.01
TRIM48Q8IWZ4 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
TRIM48Q8IWZ4 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TRIM48Q8IWZ4 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRIM48Q8IWZ4 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRIM48Q8IWZ4 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRIM48Q8IWZ4 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TRIM48Q8IWZ4 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC15.1■□□□□ 0.01
TRIM48Q8IWZ4 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
TRIM48Q8IWZ4 ACTG1P3-201ENST00000431775 1114 ntBASIC15.1■□□□□ 0.01
TRIM48Q8IWZ4 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC15.1■□□□□ 0.01
TRIM48Q8IWZ4 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TRIM48Q8IWZ4 AL355864.2-201ENST00000447420 863 ntBASIC15.1■□□□□ 0.01
TRIM48Q8IWZ4 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
TRIM48Q8IWZ4 AP001063.1-201ENST00000568332 529 ntBASIC15.1■□□□□ 0.01
TRIM48Q8IWZ4 APOC4-201ENST00000591600 348 ntTSL 3 BASIC15.1■□□□□ 0.01
TRIM48Q8IWZ4 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TRIM48Q8IWZ4 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC15.1■□□□□ 0.01
TRIM48Q8IWZ4 AC017083.2-201ENST00000608069 979 ntBASIC15.1■□□□□ 0.01
TRIM48Q8IWZ4 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC15.1■□□□□ 0.01
TRIM48Q8IWZ4 PFAS-212ENST00000625942 396 ntTSL 5 BASIC15.1■□□□□ 0.01
TRIM48Q8IWZ4 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRIM48Q8IWZ4 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRIM48Q8IWZ4 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
TRIM48Q8IWZ4 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRIM48Q8IWZ4 AL365203.3-201ENST00000609742 2057 ntBASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms