Protein–RNA interactions for Protein: Q8IWA6

CCDC60, Coiled-coil domain-containing protein 60, humanhuman

Predicted RBP Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60Q8IWA6 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC16.95■□□□□ 0.3
CCDC60Q8IWA6 MIR4741-201ENST00000579822 90 ntBASIC16.95■□□□□ 0.3
CCDC60Q8IWA6 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC16.95■□□□□ 0.3
CCDC60Q8IWA6 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC16.95■□□□□ 0.3
CCDC60Q8IWA6 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC60Q8IWA6 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC60Q8IWA6 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC60Q8IWA6 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC60Q8IWA6 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC60Q8IWA6 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC16.95■□□□□ 0.3
CCDC60Q8IWA6 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC60Q8IWA6 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC16.95■□□□□ 0.3
CCDC60Q8IWA6 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC16.95■□□□□ 0.3
CCDC60Q8IWA6 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC16.95■□□□□ 0.3
CCDC60Q8IWA6 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC16.95■□□□□ 0.3
CCDC60Q8IWA6 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC16.94■□□□□ 0.3
CCDC60Q8IWA6 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC60Q8IWA6 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC60Q8IWA6 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC60Q8IWA6 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC60Q8IWA6 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC60Q8IWA6 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC60Q8IWA6 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC16.94■□□□□ 0.3
CCDC60Q8IWA6 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
CCDC60Q8IWA6 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC16.94■□□□□ 0.3
CCDC60Q8IWA6 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC60Q8IWA6 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC60Q8IWA6 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC60Q8IWA6 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC16.94■□□□□ 0.3
CCDC60Q8IWA6 CELP-203ENST00000624767 2414 ntTSL 5 BASIC16.94■□□□□ 0.3
CCDC60Q8IWA6 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
CCDC60Q8IWA6 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC60Q8IWA6 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC60Q8IWA6 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC60Q8IWA6 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC16.94■□□□□ 0.3
CCDC60Q8IWA6 CNN2P10-201ENST00000443067 918 ntBASIC16.94■□□□□ 0.3
CCDC60Q8IWA6 FAM86HP-204ENST00000513466 959 ntBASIC16.94■□□□□ 0.3
CCDC60Q8IWA6 PACS1-203ENST00000524815 628 ntTSL 4 BASIC16.94■□□□□ 0.3
CCDC60Q8IWA6 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC60Q8IWA6 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC60Q8IWA6 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC16.94■□□□□ 0.3
CCDC60Q8IWA6 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC16.94■□□□□ 0.3
CCDC60Q8IWA6 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC16.94■□□□□ 0.3
CCDC60Q8IWA6 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC16.94■□□□□ 0.3
CCDC60Q8IWA6 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
CCDC60Q8IWA6 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC60Q8IWA6 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
CCDC60Q8IWA6 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
CCDC60Q8IWA6 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC60Q8IWA6 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC60Q8IWA6 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC16.94■□□□□ 0.3
CCDC60Q8IWA6 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC16.94■□□□□ 0.3
CCDC60Q8IWA6 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
CCDC60Q8IWA6 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC60Q8IWA6 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC60Q8IWA6 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC60Q8IWA6 CLUHP2-201ENST00000426660 1303 ntBASIC16.94■□□□□ 0.3
CCDC60Q8IWA6 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC60Q8IWA6 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC16.93■□□□□ 0.3
CCDC60Q8IWA6 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
CCDC60Q8IWA6 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC60Q8IWA6 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC60Q8IWA6 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC16.93■□□□□ 0.3
CCDC60Q8IWA6 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC60Q8IWA6 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC16.93■□□□□ 0.3
CCDC60Q8IWA6 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
CCDC60Q8IWA6 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC16.93■□□□□ 0.3
CCDC60Q8IWA6 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC60Q8IWA6 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC60Q8IWA6 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
CCDC60Q8IWA6 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC16.93■□□□□ 0.3
CCDC60Q8IWA6 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC60Q8IWA6 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC16.93■□□□□ 0.3
CCDC60Q8IWA6 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC60Q8IWA6 BRWD1P1-201ENST00000401091 371 ntBASIC16.93■□□□□ 0.3
CCDC60Q8IWA6 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC16.93■□□□□ 0.3
CCDC60Q8IWA6 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC16.93■□□□□ 0.3
CCDC60Q8IWA6 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC16.93■□□□□ 0.3
CCDC60Q8IWA6 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC16.93■□□□□ 0.3
CCDC60Q8IWA6 AC108725.1-201ENST00000495472 409 ntBASIC16.93■□□□□ 0.3
CCDC60Q8IWA6 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC16.93■□□□□ 0.3
CCDC60Q8IWA6 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
CCDC60Q8IWA6 AP006547.1-201ENST00000563435 692 ntBASIC16.93■□□□□ 0.3
CCDC60Q8IWA6 RN7SL219P-201ENST00000582872 296 ntBASIC16.93■□□□□ 0.3
CCDC60Q8IWA6 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC16.93■□□□□ 0.3
CCDC60Q8IWA6 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC16.93■□□□□ 0.3
CCDC60Q8IWA6 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC60Q8IWA6 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
CCDC60Q8IWA6 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC60Q8IWA6 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC60Q8IWA6 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC60Q8IWA6 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC60Q8IWA6 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC60Q8IWA6 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC60Q8IWA6 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC16.93■□□□□ 0.3
CCDC60Q8IWA6 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC16.93■□□□□ 0.3
CCDC60Q8IWA6 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC60Q8IWA6 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
CCDC60Q8IWA6 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC60Q8IWA6 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms