Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
H3F3CQ6NXT2 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
H3F3CQ6NXT2 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
H3F3CQ6NXT2 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
H3F3CQ6NXT2 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
H3F3CQ6NXT2 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
H3F3CQ6NXT2 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
H3F3CQ6NXT2 AL138709.1-201ENST00000614840 1693 ntBASIC14.2□□□□□ -0.14
H3F3CQ6NXT2 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
H3F3CQ6NXT2 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
H3F3CQ6NXT2 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC14.2□□□□□ -0.14
H3F3CQ6NXT2 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
H3F3CQ6NXT2 KRT8P35-201ENST00000483942 1338 ntBASIC14.2□□□□□ -0.14
H3F3CQ6NXT2 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
H3F3CQ6NXT2 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
H3F3CQ6NXT2 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC14.2□□□□□ -0.14
H3F3CQ6NXT2 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
H3F3CQ6NXT2 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC14.2□□□□□ -0.14
H3F3CQ6NXT2 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
H3F3CQ6NXT2 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
H3F3CQ6NXT2 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
H3F3CQ6NXT2 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
H3F3CQ6NXT2 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
H3F3CQ6NXT2 KLF2P2-201ENST00000416807 1039 ntBASIC14.2□□□□□ -0.14
H3F3CQ6NXT2 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC14.2□□□□□ -0.14
H3F3CQ6NXT2 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC14.2□□□□□ -0.14
H3F3CQ6NXT2 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC14.2□□□□□ -0.14
H3F3CQ6NXT2 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC14.2□□□□□ -0.14
H3F3CQ6NXT2 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC14.2□□□□□ -0.14
H3F3CQ6NXT2 RPL8-205ENST00000527914 551 ntTSL 3 BASIC14.2□□□□□ -0.14
H3F3CQ6NXT2 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC14.2□□□□□ -0.14
H3F3CQ6NXT2 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
H3F3CQ6NXT2 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC14.2□□□□□ -0.14
H3F3CQ6NXT2 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC14.2□□□□□ -0.14
H3F3CQ6NXT2 MIR6799-201ENST00000620297 69 ntBASIC14.2□□□□□ -0.14
H3F3CQ6NXT2 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC14.2□□□□□ -0.14
H3F3CQ6NXT2 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
H3F3CQ6NXT2 AC126177.1-201ENST00000547829 2218 ntBASIC14.2□□□□□ -0.14
H3F3CQ6NXT2 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC14.2□□□□□ -0.14
H3F3CQ6NXT2 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC14.2□□□□□ -0.14
H3F3CQ6NXT2 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC14.2□□□□□ -0.14
H3F3CQ6NXT2 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
H3F3CQ6NXT2 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC14.2□□□□□ -0.14
H3F3CQ6NXT2 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC14.2□□□□□ -0.14
H3F3CQ6NXT2 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
H3F3CQ6NXT2 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
H3F3CQ6NXT2 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC14.2□□□□□ -0.14
H3F3CQ6NXT2 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
H3F3CQ6NXT2 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
H3F3CQ6NXT2 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
H3F3CQ6NXT2 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
H3F3CQ6NXT2 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
H3F3CQ6NXT2 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
H3F3CQ6NXT2 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC14.19□□□□□ -0.14
H3F3CQ6NXT2 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
H3F3CQ6NXT2 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC14.19□□□□□ -0.14
H3F3CQ6NXT2 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC14.19□□□□□ -0.14
H3F3CQ6NXT2 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
H3F3CQ6NXT2 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC14.19□□□□□ -0.14
H3F3CQ6NXT2 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
H3F3CQ6NXT2 AC006001.1-201ENST00000325130 474 ntBASIC14.19□□□□□ -0.14
H3F3CQ6NXT2 GUK1-206ENST00000366723 845 ntTSL 5 BASIC14.19□□□□□ -0.14
H3F3CQ6NXT2 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
H3F3CQ6NXT2 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC14.19□□□□□ -0.14
H3F3CQ6NXT2 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
H3F3CQ6NXT2 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
H3F3CQ6NXT2 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC14.19□□□□□ -0.14
H3F3CQ6NXT2 AC104457.1-201ENST00000401024 814 ntBASIC14.19□□□□□ -0.14
H3F3CQ6NXT2 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC14.19□□□□□ -0.14
H3F3CQ6NXT2 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC14.19□□□□□ -0.14
H3F3CQ6NXT2 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
H3F3CQ6NXT2 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC14.19□□□□□ -0.14
H3F3CQ6NXT2 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC14.19□□□□□ -0.14
H3F3CQ6NXT2 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
H3F3CQ6NXT2 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
H3F3CQ6NXT2 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC14.19□□□□□ -0.14
H3F3CQ6NXT2 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC14.19□□□□□ -0.14
H3F3CQ6NXT2 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC14.19□□□□□ -0.14
H3F3CQ6NXT2 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
H3F3CQ6NXT2 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC14.19□□□□□ -0.14
H3F3CQ6NXT2 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC14.19□□□□□ -0.14
H3F3CQ6NXT2 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
H3F3CQ6NXT2 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC14.19□□□□□ -0.14
H3F3CQ6NXT2 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
H3F3CQ6NXT2 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
H3F3CQ6NXT2 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
H3F3CQ6NXT2 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
H3F3CQ6NXT2 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
H3F3CQ6NXT2 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
H3F3CQ6NXT2 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
H3F3CQ6NXT2 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
H3F3CQ6NXT2 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC14.19□□□□□ -0.14
H3F3CQ6NXT2 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
H3F3CQ6NXT2 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC14.19□□□□□ -0.14
H3F3CQ6NXT2 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
H3F3CQ6NXT2 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC14.18□□□□□ -0.14
H3F3CQ6NXT2 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
H3F3CQ6NXT2 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
H3F3CQ6NXT2 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
H3F3CQ6NXT2 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms