Protein–RNA interactions for Protein: Q6IMN6

CAPRIN2, Caprin-2, humanhuman

Known RBP Predictions only

Length 1,127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN2Q6IMN6 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CAPRIN2Q6IMN6 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CAPRIN2Q6IMN6 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
CAPRIN2Q6IMN6 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CAPRIN2Q6IMN6 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CAPRIN2Q6IMN6 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CAPRIN2Q6IMN6 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CAPRIN2Q6IMN6 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CAPRIN2Q6IMN6 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CAPRIN2Q6IMN6 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC15.69■□□□□ 0.1
CAPRIN2Q6IMN6 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CAPRIN2Q6IMN6 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
CAPRIN2Q6IMN6 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
CAPRIN2Q6IMN6 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
CAPRIN2Q6IMN6 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC15.69■□□□□ 0.1
CAPRIN2Q6IMN6 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
CAPRIN2Q6IMN6 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC15.68■□□□□ 0.1
CAPRIN2Q6IMN6 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC15.68■□□□□ 0.1
CAPRIN2Q6IMN6 TMBIM7P-203ENST00000641617 1718 ntBASIC15.68■□□□□ 0.1
CAPRIN2Q6IMN6 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
CAPRIN2Q6IMN6 BEND3P1-201ENST00000421591 1944 ntBASIC15.68■□□□□ 0.1
CAPRIN2Q6IMN6 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CAPRIN2Q6IMN6 DGCR9-201ENST00000609630 2415 ntBASIC15.68■□□□□ 0.1
CAPRIN2Q6IMN6 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
CAPRIN2Q6IMN6 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CAPRIN2Q6IMN6 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CAPRIN2Q6IMN6 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
CAPRIN2Q6IMN6 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CAPRIN2Q6IMN6 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CAPRIN2Q6IMN6 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
CAPRIN2Q6IMN6 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CAPRIN2Q6IMN6 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CAPRIN2Q6IMN6 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
CAPRIN2Q6IMN6 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CAPRIN2Q6IMN6 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC15.68■□□□□ 0.1
CAPRIN2Q6IMN6 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
CAPRIN2Q6IMN6 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CAPRIN2Q6IMN6 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC15.68■□□□□ 0.1
CAPRIN2Q6IMN6 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CAPRIN2Q6IMN6 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CAPRIN2Q6IMN6 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC15.68■□□□□ 0.1
CAPRIN2Q6IMN6 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
CAPRIN2Q6IMN6 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC15.68■□□□□ 0.1
CAPRIN2Q6IMN6 EEF1DP4-201ENST00000446006 880 ntBASIC15.68■□□□□ 0.1
CAPRIN2Q6IMN6 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CAPRIN2Q6IMN6 AC093214.1-201ENST00000511688 1107 ntBASIC15.68■□□□□ 0.1
CAPRIN2Q6IMN6 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC15.68■□□□□ 0.1
CAPRIN2Q6IMN6 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CAPRIN2Q6IMN6 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC15.68■□□□□ 0.1
CAPRIN2Q6IMN6 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC15.68■□□□□ 0.1
CAPRIN2Q6IMN6 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CAPRIN2Q6IMN6 AC012645.4-201ENST00000610691 1061 ntBASIC15.68■□□□□ 0.1
CAPRIN2Q6IMN6 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC15.68■□□□□ 0.1
CAPRIN2Q6IMN6 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CAPRIN2Q6IMN6 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
CAPRIN2Q6IMN6 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC15.68■□□□□ 0.1
CAPRIN2Q6IMN6 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
CAPRIN2Q6IMN6 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CAPRIN2Q6IMN6 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
CAPRIN2Q6IMN6 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
CAPRIN2Q6IMN6 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CAPRIN2Q6IMN6 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CAPRIN2Q6IMN6 IMPDH1P4-201ENST00000445028 1534 ntBASIC15.68■□□□□ 0.1
CAPRIN2Q6IMN6 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
CAPRIN2Q6IMN6 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC15.68■□□□□ 0.1
CAPRIN2Q6IMN6 AC087499.5-201ENST00000452760 1342 ntBASIC15.68■□□□□ 0.1
CAPRIN2Q6IMN6 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CAPRIN2Q6IMN6 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
CAPRIN2Q6IMN6 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CAPRIN2Q6IMN6 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CAPRIN2Q6IMN6 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CAPRIN2Q6IMN6 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
CAPRIN2Q6IMN6 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CAPRIN2Q6IMN6 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CAPRIN2Q6IMN6 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC15.67■□□□□ 0.1
CAPRIN2Q6IMN6 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC15.67■□□□□ 0.1
CAPRIN2Q6IMN6 BNIP3P1-202ENST00000550043 1585 ntBASIC15.67■□□□□ 0.1
CAPRIN2Q6IMN6 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC15.67■□□□□ 0.1
CAPRIN2Q6IMN6 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CAPRIN2Q6IMN6 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CAPRIN2Q6IMN6 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CAPRIN2Q6IMN6 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CAPRIN2Q6IMN6 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CAPRIN2Q6IMN6 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CAPRIN2Q6IMN6 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC15.67■□□□□ 0.1
CAPRIN2Q6IMN6 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC15.67■□□□□ 0.1
CAPRIN2Q6IMN6 AC004890.2-204ENST00000481968 304 ntBASIC15.67■□□□□ 0.1
CAPRIN2Q6IMN6 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC15.67■□□□□ 0.1
CAPRIN2Q6IMN6 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC15.67■□□□□ 0.1
CAPRIN2Q6IMN6 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC15.67■□□□□ 0.1
CAPRIN2Q6IMN6 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC15.67■□□□□ 0.1
CAPRIN2Q6IMN6 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC15.67■□□□□ 0.1
CAPRIN2Q6IMN6 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
CAPRIN2Q6IMN6 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CAPRIN2Q6IMN6 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CAPRIN2Q6IMN6 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CAPRIN2Q6IMN6 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CAPRIN2Q6IMN6 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CAPRIN2Q6IMN6 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
CAPRIN2Q6IMN6 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 59.5 ms