Protein–RNA interactions for Protein: Q6ICC9

RTL6, Retrotransposon Gag-like protein 6, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL6Q6ICC9 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
RTL6Q6ICC9 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
RTL6Q6ICC9 ACKR1-201ENST00000368121 1240 ntBASIC13.88□□□□□ -0.19
RTL6Q6ICC9 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
RTL6Q6ICC9 BRF1-202ENST00000379932 884 ntTSL 5 BASIC13.88□□□□□ -0.19
RTL6Q6ICC9 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
RTL6Q6ICC9 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
RTL6Q6ICC9 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
RTL6Q6ICC9 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC13.88□□□□□ -0.19
RTL6Q6ICC9 FO681548.1-201ENST00000455617 1132 ntBASIC13.88□□□□□ -0.19
RTL6Q6ICC9 GAPDHP40-201ENST00000505218 1006 ntBASIC13.88□□□□□ -0.19
RTL6Q6ICC9 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC13.88□□□□□ -0.19
RTL6Q6ICC9 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
RTL6Q6ICC9 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
RTL6Q6ICC9 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC13.88□□□□□ -0.19
RTL6Q6ICC9 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
RTL6Q6ICC9 TECR-220ENST00000600083 1204 ntTSL 2 BASIC13.88□□□□□ -0.19
RTL6Q6ICC9 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC13.88□□□□□ -0.19
RTL6Q6ICC9 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
RTL6Q6ICC9 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
RTL6Q6ICC9 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC13.88□□□□□ -0.19
RTL6Q6ICC9 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RTL6Q6ICC9 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC13.88□□□□□ -0.19
RTL6Q6ICC9 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC13.88□□□□□ -0.19
RTL6Q6ICC9 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
RTL6Q6ICC9 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
RTL6Q6ICC9 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC13.88□□□□□ -0.19
RTL6Q6ICC9 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
RTL6Q6ICC9 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RTL6Q6ICC9 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC13.88□□□□□ -0.19
RTL6Q6ICC9 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC13.88□□□□□ -0.19
RTL6Q6ICC9 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RTL6Q6ICC9 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RTL6Q6ICC9 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
RTL6Q6ICC9 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
RTL6Q6ICC9 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
RTL6Q6ICC9 AL365209.1-201ENST00000624418 6473 ntBASIC13.87□□□□□ -0.19
RTL6Q6ICC9 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC13.87□□□□□ -0.19
RTL6Q6ICC9 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
RTL6Q6ICC9 TMBIM7P-203ENST00000641617 1718 ntBASIC13.87□□□□□ -0.19
RTL6Q6ICC9 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC13.87□□□□□ -0.19
RTL6Q6ICC9 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
RTL6Q6ICC9 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
RTL6Q6ICC9 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RTL6Q6ICC9 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
RTL6Q6ICC9 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
RTL6Q6ICC9 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
RTL6Q6ICC9 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
RTL6Q6ICC9 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RTL6Q6ICC9 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RTL6Q6ICC9 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RTL6Q6ICC9 MIR1908-201ENST00000410394 80 ntBASIC13.87□□□□□ -0.19
RTL6Q6ICC9 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC13.87□□□□□ -0.19
RTL6Q6ICC9 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC13.87□□□□□ -0.19
RTL6Q6ICC9 AC016694.1-201ENST00000434179 700 ntBASIC13.87□□□□□ -0.19
RTL6Q6ICC9 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
RTL6Q6ICC9 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC13.87□□□□□ -0.19
RTL6Q6ICC9 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC13.87□□□□□ -0.19
RTL6Q6ICC9 AC022137.2-201ENST00000503482 481 ntBASIC13.87□□□□□ -0.19
RTL6Q6ICC9 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
RTL6Q6ICC9 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC13.87□□□□□ -0.19
RTL6Q6ICC9 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
RTL6Q6ICC9 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC13.87□□□□□ -0.19
RTL6Q6ICC9 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC13.87□□□□□ -0.19
RTL6Q6ICC9 PACS1-203ENST00000524815 628 ntTSL 4 BASIC13.87□□□□□ -0.19
RTL6Q6ICC9 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC13.87□□□□□ -0.19
RTL6Q6ICC9 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC13.87□□□□□ -0.19
RTL6Q6ICC9 GNRHR2-203ENST00000581100 1187 ntBASIC13.87□□□□□ -0.19
RTL6Q6ICC9 MIR4538-201ENST00000581377 78 ntBASIC13.87□□□□□ -0.19
RTL6Q6ICC9 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC13.87□□□□□ -0.19
RTL6Q6ICC9 HADH-212ENST00000638621 741 ntTSL 5 BASIC13.87□□□□□ -0.19
RTL6Q6ICC9 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC13.87□□□□□ -0.19
RTL6Q6ICC9 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RTL6Q6ICC9 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
RTL6Q6ICC9 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RTL6Q6ICC9 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC13.87□□□□□ -0.19
RTL6Q6ICC9 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC13.87□□□□□ -0.19
RTL6Q6ICC9 POLL-217ENST00000628479 1953 ntTSL 5 BASIC13.87□□□□□ -0.19
RTL6Q6ICC9 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
RTL6Q6ICC9 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RTL6Q6ICC9 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC13.87□□□□□ -0.19
RTL6Q6ICC9 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC13.87□□□□□ -0.19
RTL6Q6ICC9 AL161772.1-201ENST00000610494 4412 ntBASIC13.87□□□□□ -0.19
RTL6Q6ICC9 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
RTL6Q6ICC9 LOX-206ENST00000639739 1626 ntTSL 5 BASIC13.86□□□□□ -0.19
RTL6Q6ICC9 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RTL6Q6ICC9 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
RTL6Q6ICC9 OR2I1P-210ENST00000642037 4691 ntBASIC13.86□□□□□ -0.19
RTL6Q6ICC9 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RTL6Q6ICC9 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
RTL6Q6ICC9 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RTL6Q6ICC9 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC13.86□□□□□ -0.19
RTL6Q6ICC9 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RTL6Q6ICC9 SUN1-204ENST00000403868 978 ntTSL 2 BASIC13.86□□□□□ -0.19
RTL6Q6ICC9 ACTBP11-201ENST00000436287 1126 ntBASIC13.86□□□□□ -0.19
RTL6Q6ICC9 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
RTL6Q6ICC9 RNA5SP412-201ENST00000516234 123 ntBASIC13.86□□□□□ -0.19
RTL6Q6ICC9 AP001582.1-201ENST00000525856 295 ntBASIC13.86□□□□□ -0.19
RTL6Q6ICC9 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC13.86□□□□□ -0.19
RTL6Q6ICC9 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms