Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC10.53□□□□□ -0.72
LINC00242Q5T6M2 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
LINC00242Q5T6M2 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC10.53□□□□□ -0.72
LINC00242Q5T6M2 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
LINC00242Q5T6M2 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
LINC00242Q5T6M2 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC10.53□□□□□ -0.72
LINC00242Q5T6M2 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
LINC00242Q5T6M2 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
LINC00242Q5T6M2 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
LINC00242Q5T6M2 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
LINC00242Q5T6M2 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC10.53□□□□□ -0.72
LINC00242Q5T6M2 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
LINC00242Q5T6M2 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
LINC00242Q5T6M2 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
LINC00242Q5T6M2 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
LINC00242Q5T6M2 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC10.52□□□□□ -0.72
LINC00242Q5T6M2 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC10.52□□□□□ -0.72
LINC00242Q5T6M2 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.72
LINC00242Q5T6M2 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC10.52□□□□□ -0.72
LINC00242Q5T6M2 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC10.52□□□□□ -0.72
LINC00242Q5T6M2 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
LINC00242Q5T6M2 AC007787.1-201ENST00000588095 1583 ntBASIC10.52□□□□□ -0.72
LINC00242Q5T6M2 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC10.52□□□□□ -0.72
LINC00242Q5T6M2 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
LINC00242Q5T6M2 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC10.52□□□□□ -0.72
LINC00242Q5T6M2 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC10.52□□□□□ -0.72
LINC00242Q5T6M2 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC10.52□□□□□ -0.72
LINC00242Q5T6M2 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.72
LINC00242Q5T6M2 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
LINC00242Q5T6M2 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC10.52□□□□□ -0.73
LINC00242Q5T6M2 AC015802.1-201ENST00000588104 1449 ntBASIC10.52□□□□□ -0.73
LINC00242Q5T6M2 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC10.52□□□□□ -0.73
LINC00242Q5T6M2 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC10.52□□□□□ -0.73
LINC00242Q5T6M2 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
LINC00242Q5T6M2 AC152010.1-201ENST00000415779 2006 ntBASIC10.52□□□□□ -0.73
LINC00242Q5T6M2 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC10.52□□□□□ -0.73
LINC00242Q5T6M2 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC10.52□□□□□ -0.73
LINC00242Q5T6M2 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
LINC00242Q5T6M2 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
LINC00242Q5T6M2 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
LINC00242Q5T6M2 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC10.52□□□□□ -0.73
LINC00242Q5T6M2 ADH5P3-201ENST00000433842 1137 ntBASIC10.52□□□□□ -0.73
LINC00242Q5T6M2 TARDBPP1-201ENST00000442013 1203 ntBASIC10.52□□□□□ -0.73
LINC00242Q5T6M2 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
LINC00242Q5T6M2 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC10.52□□□□□ -0.73
LINC00242Q5T6M2 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC10.52□□□□□ -0.73
LINC00242Q5T6M2 AC079140.1-201ENST00000508039 487 ntBASIC10.52□□□□□ -0.73
LINC00242Q5T6M2 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC10.52□□□□□ -0.73
LINC00242Q5T6M2 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC10.52□□□□□ -0.73
LINC00242Q5T6M2 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC10.52□□□□□ -0.73
LINC00242Q5T6M2 RARRES2P9-201ENST00000565168 469 ntBASIC10.52□□□□□ -0.73
LINC00242Q5T6M2 AC106730.1-201ENST00000566722 1090 ntBASIC10.52□□□□□ -0.73
LINC00242Q5T6M2 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC10.52□□□□□ -0.73
LINC00242Q5T6M2 SLC25A6P4-201ENST00000586535 553 ntBASIC10.52□□□□□ -0.73
LINC00242Q5T6M2 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC10.52□□□□□ -0.73
LINC00242Q5T6M2 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC10.52□□□□□ -0.73
LINC00242Q5T6M2 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
LINC00242Q5T6M2 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC10.52□□□□□ -0.73
LINC00242Q5T6M2 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC10.52□□□□□ -0.73
LINC00242Q5T6M2 AC026120.1-201ENST00000611536 926 ntBASIC10.52□□□□□ -0.73
LINC00242Q5T6M2 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
LINC00242Q5T6M2 AL645728.2-202ENST00000641679 227 ntBASIC10.52□□□□□ -0.73
LINC00242Q5T6M2 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
LINC00242Q5T6M2 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
LINC00242Q5T6M2 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
LINC00242Q5T6M2 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC10.52□□□□□ -0.73
LINC00242Q5T6M2 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
LINC00242Q5T6M2 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
LINC00242Q5T6M2 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
LINC00242Q5T6M2 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
LINC00242Q5T6M2 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
LINC00242Q5T6M2 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
LINC00242Q5T6M2 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC10.52□□□□□ -0.73
LINC00242Q5T6M2 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC10.52□□□□□ -0.73
LINC00242Q5T6M2 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
LINC00242Q5T6M2 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
LINC00242Q5T6M2 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
LINC00242Q5T6M2 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
LINC00242Q5T6M2 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
LINC00242Q5T6M2 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC10.52□□□□□ -0.73
LINC00242Q5T6M2 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
LINC00242Q5T6M2 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
LINC00242Q5T6M2 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
LINC00242Q5T6M2 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
LINC00242Q5T6M2 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC10.52□□□□□ -0.73
LINC00242Q5T6M2 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
LINC00242Q5T6M2 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
LINC00242Q5T6M2 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
LINC00242Q5T6M2 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC10.52□□□□□ -0.73
LINC00242Q5T6M2 NIN-202ENST00000324330 4364 ntTSL 5 BASIC10.51□□□□□ -0.73
LINC00242Q5T6M2 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
LINC00242Q5T6M2 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC10.51□□□□□ -0.73
LINC00242Q5T6M2 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
LINC00242Q5T6M2 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
LINC00242Q5T6M2 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
LINC00242Q5T6M2 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
LINC00242Q5T6M2 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
LINC00242Q5T6M2 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
LINC00242Q5T6M2 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
LINC00242Q5T6M2 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC10.51□□□□□ -0.73
Retrieved 100 of 98,524 protein–RNA pairs in 62.8 ms