Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
PDS5AQ29RF7 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PDS5AQ29RF7 RBM38-204ENST00000371219 760 ntTSL 2 BASIC18.17■□□□□ 0.5
PDS5AQ29RF7 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PDS5AQ29RF7 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PDS5AQ29RF7 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC18.17■□□□□ 0.5
PDS5AQ29RF7 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
PDS5AQ29RF7 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC18.17■□□□□ 0.5
PDS5AQ29RF7 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC18.17■□□□□ 0.5
PDS5AQ29RF7 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PDS5AQ29RF7 AL139099.5-201ENST00000635274 300 ntBASIC18.17■□□□□ 0.5
PDS5AQ29RF7 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC18.17■□□□□ 0.5
PDS5AQ29RF7 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
PDS5AQ29RF7 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
PDS5AQ29RF7 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PDS5AQ29RF7 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PDS5AQ29RF7 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC18.17■□□□□ 0.5
PDS5AQ29RF7 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC18.17■□□□□ 0.5
PDS5AQ29RF7 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PDS5AQ29RF7 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC18.17■□□□□ 0.5
PDS5AQ29RF7 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PDS5AQ29RF7 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
PDS5AQ29RF7 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
PDS5AQ29RF7 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC18.16■□□□□ 0.5
PDS5AQ29RF7 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
PDS5AQ29RF7 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PDS5AQ29RF7 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PDS5AQ29RF7 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
PDS5AQ29RF7 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PDS5AQ29RF7 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC18.16■□□□□ 0.5
PDS5AQ29RF7 PAUPAR-201ENST00000630360 2965 ntBASIC18.16■□□□□ 0.5
PDS5AQ29RF7 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC18.16■□□□□ 0.5
PDS5AQ29RF7 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PDS5AQ29RF7 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
PDS5AQ29RF7 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC18.16■□□□□ 0.5
PDS5AQ29RF7 CSH2-202ENST00000345366 598 ntTSL 5 BASIC18.16■□□□□ 0.5
PDS5AQ29RF7 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC18.16■□□□□ 0.5
PDS5AQ29RF7 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PDS5AQ29RF7 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PDS5AQ29RF7 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC18.16■□□□□ 0.5
PDS5AQ29RF7 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC18.16■□□□□ 0.5
PDS5AQ29RF7 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
PDS5AQ29RF7 REXO1L2P-201ENST00000425429 2069 ntBASIC18.16■□□□□ 0.5
PDS5AQ29RF7 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC18.16■□□□□ 0.5
PDS5AQ29RF7 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC18.16■□□□□ 0.5
PDS5AQ29RF7 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC18.16■□□□□ 0.5
PDS5AQ29RF7 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC18.16■□□□□ 0.5
PDS5AQ29RF7 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC18.16■□□□□ 0.5
PDS5AQ29RF7 MIR4783-201ENST00000580343 82 ntBASIC18.16■□□□□ 0.5
PDS5AQ29RF7 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC18.16■□□□□ 0.5
PDS5AQ29RF7 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC18.16■□□□□ 0.5
PDS5AQ29RF7 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PDS5AQ29RF7 AC009955.4-201ENST00000597192 544 ntBASIC18.16■□□□□ 0.5
PDS5AQ29RF7 AC008825.2-201ENST00000603374 718 ntBASIC18.16■□□□□ 0.5
PDS5AQ29RF7 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC18.16■□□□□ 0.5
PDS5AQ29RF7 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC18.16■□□□□ 0.5
PDS5AQ29RF7 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC18.16■□□□□ 0.5
PDS5AQ29RF7 AC138028.6-201ENST00000616106 1482 ntBASIC18.16■□□□□ 0.5
PDS5AQ29RF7 AC023090.2-201ENST00000625182 2110 ntBASIC18.16■□□□□ 0.5
PDS5AQ29RF7 INE2-201ENST00000630399 1874 ntBASIC18.16■□□□□ 0.5
PDS5AQ29RF7 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
PDS5AQ29RF7 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC18.15■□□□□ 0.5
PDS5AQ29RF7 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PDS5AQ29RF7 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PDS5AQ29RF7 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PDS5AQ29RF7 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
PDS5AQ29RF7 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PDS5AQ29RF7 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PDS5AQ29RF7 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PDS5AQ29RF7 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC18.15■□□□□ 0.5
PDS5AQ29RF7 AC009093.2-202ENST00000620513 2079 ntBASIC18.15■□□□□ 0.5
PDS5AQ29RF7 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
PDS5AQ29RF7 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC18.15■□□□□ 0.5
PDS5AQ29RF7 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PDS5AQ29RF7 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC18.15■□□□□ 0.5
PDS5AQ29RF7 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
PDS5AQ29RF7 ACE-204ENST00000428043 5120 ntTSL 2 BASIC18.15■□□□□ 0.5
PDS5AQ29RF7 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PDS5AQ29RF7 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC18.15■□□□□ 0.5
PDS5AQ29RF7 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PDS5AQ29RF7 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
PDS5AQ29RF7 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC18.15■□□□□ 0.5
PDS5AQ29RF7 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC18.15■□□□□ 0.5
PDS5AQ29RF7 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PDS5AQ29RF7 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC18.15■□□□□ 0.5
PDS5AQ29RF7 HNRNPA1P63-201ENST00000427917 963 ntBASIC18.15■□□□□ 0.5
PDS5AQ29RF7 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PDS5AQ29RF7 BX284668.4-201ENST00000453917 508 ntBASIC18.15■□□□□ 0.5
PDS5AQ29RF7 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC18.15■□□□□ 0.5
PDS5AQ29RF7 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC18.15■□□□□ 0.5
PDS5AQ29RF7 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC18.15■□□□□ 0.5
PDS5AQ29RF7 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PDS5AQ29RF7 LCK-206ENST00000373564 2137 ntTSL 5 BASIC18.15■□□□□ 0.5
PDS5AQ29RF7 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PDS5AQ29RF7 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
PDS5AQ29RF7 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PDS5AQ29RF7 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC18.14■□□□□ 0.5
PDS5AQ29RF7 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.5
PDS5AQ29RF7 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.5
PDS5AQ29RF7 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms