Protein–RNA interactions for Protein: P78363

ABCA4, Retinal-specific ATP-binding cassette transporter, humanhuman

Predictions only

Length 2,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4P78363 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC13.18□□□□□ -0.3
ABCA4P78363 RNA5SP486-201ENST00000515961 83 ntBASIC13.18□□□□□ -0.3
ABCA4P78363 EHF-205ENST00000527935 557 ntTSL 2 BASIC13.18□□□□□ -0.3
ABCA4P78363 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC13.18□□□□□ -0.3
ABCA4P78363 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC13.18□□□□□ -0.3
ABCA4P78363 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC13.18□□□□□ -0.3
ABCA4P78363 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ABCA4P78363 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ABCA4P78363 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
ABCA4P78363 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC13.18□□□□□ -0.3
ABCA4P78363 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ABCA4P78363 AL359258.3-201ENST00000622910 2331 ntBASIC13.18□□□□□ -0.3
ABCA4P78363 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC13.18□□□□□ -0.3
ABCA4P78363 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC13.18□□□□□ -0.3
ABCA4P78363 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC13.18□□□□□ -0.3
ABCA4P78363 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
ABCA4P78363 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
ABCA4P78363 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
ABCA4P78363 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
ABCA4P78363 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ABCA4P78363 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
ABCA4P78363 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ABCA4P78363 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC13.18□□□□□ -0.3
ABCA4P78363 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC13.18□□□□□ -0.3
ABCA4P78363 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
ABCA4P78363 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC13.18□□□□□ -0.3
ABCA4P78363 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
ABCA4P78363 RN7SL720P-201ENST00000488178 304 ntBASIC13.18□□□□□ -0.3
ABCA4P78363 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC13.18□□□□□ -0.3
ABCA4P78363 AC245884.6-201ENST00000515672 1067 ntBASIC13.18□□□□□ -0.3
ABCA4P78363 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC13.18□□□□□ -0.3
ABCA4P78363 RN7SL48P-201ENST00000579283 293 ntBASIC13.18□□□□□ -0.3
ABCA4P78363 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC13.18□□□□□ -0.3
ABCA4P78363 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
ABCA4P78363 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC13.17□□□□□ -0.3
ABCA4P78363 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC13.17□□□□□ -0.3
ABCA4P78363 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
ABCA4P78363 AL158070.2-201ENST00000623713 1621 ntBASIC13.17□□□□□ -0.3
ABCA4P78363 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
ABCA4P78363 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ABCA4P78363 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ABCA4P78363 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC13.17□□□□□ -0.3
ABCA4P78363 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
ABCA4P78363 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC13.17□□□□□ -0.3
ABCA4P78363 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC13.17□□□□□ -0.3
ABCA4P78363 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
ABCA4P78363 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ABCA4P78363 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC13.17□□□□□ -0.3
ABCA4P78363 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ABCA4P78363 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
ABCA4P78363 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
ABCA4P78363 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC13.17□□□□□ -0.3
ABCA4P78363 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ABCA4P78363 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
ABCA4P78363 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ABCA4P78363 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
ABCA4P78363 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
ABCA4P78363 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
ABCA4P78363 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC13.17□□□□□ -0.3
ABCA4P78363 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
ABCA4P78363 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC13.17□□□□□ -0.3
ABCA4P78363 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC13.17□□□□□ -0.3
ABCA4P78363 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ABCA4P78363 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ABCA4P78363 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
ABCA4P78363 B9D1-203ENST00000395615 805 ntTSL 3 BASIC13.17□□□□□ -0.3
ABCA4P78363 KRTAP10-13P-201ENST00000412914 571 ntBASIC13.17□□□□□ -0.3
ABCA4P78363 AL354877.1-201ENST00000424412 413 ntBASIC13.17□□□□□ -0.3
ABCA4P78363 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
ABCA4P78363 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC13.17□□□□□ -0.3
ABCA4P78363 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC13.17□□□□□ -0.3
ABCA4P78363 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC13.17□□□□□ -0.3
ABCA4P78363 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC13.17□□□□□ -0.3
ABCA4P78363 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
ABCA4P78363 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC13.17□□□□□ -0.3
ABCA4P78363 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
ABCA4P78363 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
ABCA4P78363 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ABCA4P78363 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
ABCA4P78363 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC13.17□□□□□ -0.3
ABCA4P78363 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
ABCA4P78363 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
ABCA4P78363 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ABCA4P78363 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC13.17□□□□□ -0.3
ABCA4P78363 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
ABCA4P78363 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC13.17□□□□□ -0.3
ABCA4P78363 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
ABCA4P78363 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ABCA4P78363 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
ABCA4P78363 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
ABCA4P78363 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ABCA4P78363 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
ABCA4P78363 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
ABCA4P78363 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
ABCA4P78363 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
ABCA4P78363 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
ABCA4P78363 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
ABCA4P78363 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC13.16□□□□□ -0.3
ABCA4P78363 AC100850.1-201ENST00000506768 649 ntBASIC13.16□□□□□ -0.3
ABCA4P78363 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC13.16□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms