Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
YBX1P67809 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
YBX1P67809 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
YBX1P67809 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC14.94□□□□□ -0.02
YBX1P67809 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC14.94□□□□□ -0.02
YBX1P67809 DRD5P1-201ENST00000456605 1438 ntBASIC14.94□□□□□ -0.02
YBX1P67809 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
YBX1P67809 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC14.94□□□□□ -0.02
YBX1P67809 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC14.94□□□□□ -0.02
YBX1P67809 AC097359.2-201ENST00000604992 2389 ntBASIC14.94□□□□□ -0.02
YBX1P67809 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
YBX1P67809 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
YBX1P67809 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC14.94□□□□□ -0.02
YBX1P67809 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
YBX1P67809 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
YBX1P67809 AC087499.6-201ENST00000411576 835 ntBASIC14.94□□□□□ -0.02
YBX1P67809 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
YBX1P67809 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC14.94□□□□□ -0.02
YBX1P67809 COX20P2-201ENST00000452636 358 ntBASIC14.94□□□□□ -0.02
YBX1P67809 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
YBX1P67809 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC14.94□□□□□ -0.02
YBX1P67809 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC14.94□□□□□ -0.02
YBX1P67809 AL359711.2-201ENST00000563105 872 ntBASIC14.94□□□□□ -0.02
YBX1P67809 COX11-202ENST00000571584 1108 ntTSL 2 BASIC14.94□□□□□ -0.02
YBX1P67809 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC14.94□□□□□ -0.02
YBX1P67809 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC14.94□□□□□ -0.02
YBX1P67809 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
YBX1P67809 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC14.94□□□□□ -0.02
YBX1P67809 WFDC1-204ENST00000613603 549 ntBASIC14.94□□□□□ -0.02
YBX1P67809 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC14.94□□□□□ -0.02
YBX1P67809 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
YBX1P67809 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
YBX1P67809 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC14.94□□□□□ -0.02
YBX1P67809 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC14.94□□□□□ -0.02
YBX1P67809 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
YBX1P67809 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC14.94□□□□□ -0.02
YBX1P67809 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
YBX1P67809 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
YBX1P67809 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
YBX1P67809 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC14.94□□□□□ -0.02
YBX1P67809 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
YBX1P67809 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
YBX1P67809 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
YBX1P67809 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC14.93□□□□□ -0.02
YBX1P67809 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC14.93□□□□□ -0.02
YBX1P67809 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
YBX1P67809 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
YBX1P67809 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC14.93□□□□□ -0.02
YBX1P67809 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC14.93□□□□□ -0.02
YBX1P67809 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
YBX1P67809 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
YBX1P67809 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC14.93□□□□□ -0.02
YBX1P67809 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC14.93□□□□□ -0.02
YBX1P67809 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
YBX1P67809 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
YBX1P67809 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
YBX1P67809 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
YBX1P67809 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
YBX1P67809 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
YBX1P67809 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC14.93□□□□□ -0.02
YBX1P67809 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
YBX1P67809 PFN2-205ENST00000461868 613 ntTSL 2 BASIC14.93□□□□□ -0.02
YBX1P67809 TAF8-206ENST00000472818 719 ntTSL 2 BASIC14.93□□□□□ -0.02
YBX1P67809 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
YBX1P67809 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC14.93□□□□□ -0.02
YBX1P67809 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC14.93□□□□□ -0.02
YBX1P67809 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
YBX1P67809 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC14.93□□□□□ -0.02
YBX1P67809 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC14.93□□□□□ -0.02
YBX1P67809 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC14.93□□□□□ -0.02
YBX1P67809 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC14.93□□□□□ -0.02
YBX1P67809 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC14.93□□□□□ -0.02
YBX1P67809 SRP9-204ENST00000619790 377 ntTSL 2 BASIC14.93□□□□□ -0.02
YBX1P67809 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
YBX1P67809 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
YBX1P67809 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
YBX1P67809 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC14.93□□□□□ -0.02
YBX1P67809 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
YBX1P67809 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
YBX1P67809 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
YBX1P67809 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
YBX1P67809 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC14.93□□□□□ -0.02
YBX1P67809 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
YBX1P67809 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
YBX1P67809 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
YBX1P67809 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
YBX1P67809 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
YBX1P67809 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC14.92□□□□□ -0.02
YBX1P67809 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
YBX1P67809 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
YBX1P67809 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
YBX1P67809 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
YBX1P67809 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
YBX1P67809 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
YBX1P67809 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
YBX1P67809 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
YBX1P67809 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
YBX1P67809 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
YBX1P67809 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
YBX1P67809 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms