Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC12.47□□□□□ -0.41
LMO4P61968 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
LMO4P61968 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
LMO4P61968 ING5-213ENST00000636051 4199 ntTSL 5 BASIC12.47□□□□□ -0.41
LMO4P61968 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
LMO4P61968 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC12.47□□□□□ -0.41
LMO4P61968 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
LMO4P61968 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
LMO4P61968 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
LMO4P61968 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC12.47□□□□□ -0.41
LMO4P61968 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
LMO4P61968 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC12.47□□□□□ -0.41
LMO4P61968 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
LMO4P61968 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
LMO4P61968 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
LMO4P61968 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
LMO4P61968 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC12.47□□□□□ -0.41
LMO4P61968 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
LMO4P61968 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
LMO4P61968 RN7SKP175-201ENST00000408472 289 ntBASIC12.47□□□□□ -0.41
LMO4P61968 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC12.47□□□□□ -0.41
LMO4P61968 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC12.47□□□□□ -0.41
LMO4P61968 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
LMO4P61968 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
LMO4P61968 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC12.47□□□□□ -0.41
LMO4P61968 AC020914.3-201ENST00000594712 304 ntBASIC12.47□□□□□ -0.41
LMO4P61968 AL451050.2-201ENST00000606967 682 ntBASIC12.47□□□□□ -0.41
LMO4P61968 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC12.47□□□□□ -0.41
LMO4P61968 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC12.47□□□□□ -0.41
LMO4P61968 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
LMO4P61968 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
LMO4P61968 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC12.47□□□□□ -0.41
LMO4P61968 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
LMO4P61968 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
LMO4P61968 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC12.47□□□□□ -0.41
LMO4P61968 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC12.47□□□□□ -0.41
LMO4P61968 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC12.47□□□□□ -0.41
LMO4P61968 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
LMO4P61968 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
LMO4P61968 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
LMO4P61968 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
LMO4P61968 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC12.47□□□□□ -0.41
LMO4P61968 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
LMO4P61968 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
LMO4P61968 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
LMO4P61968 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
LMO4P61968 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC12.46□□□□□ -0.41
LMO4P61968 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
LMO4P61968 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
LMO4P61968 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
LMO4P61968 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC12.46□□□□□ -0.41
LMO4P61968 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC12.46□□□□□ -0.41
LMO4P61968 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
LMO4P61968 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
LMO4P61968 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
LMO4P61968 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
LMO4P61968 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
LMO4P61968 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC12.46□□□□□ -0.41
LMO4P61968 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC12.46□□□□□ -0.41
LMO4P61968 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC12.46□□□□□ -0.41
LMO4P61968 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC12.46□□□□□ -0.41
LMO4P61968 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC12.46□□□□□ -0.41
LMO4P61968 AC005730.2-201ENST00000564549 1184 ntBASIC12.46□□□□□ -0.41
LMO4P61968 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC12.46□□□□□ -0.41
LMO4P61968 NAT9-222ENST00000583476 583 ntTSL 3 BASIC12.46□□□□□ -0.41
LMO4P61968 AC138696.2-201ENST00000607376 223 ntBASIC12.46□□□□□ -0.41
LMO4P61968 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC12.46□□□□□ -0.41
LMO4P61968 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
LMO4P61968 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC12.46□□□□□ -0.41
LMO4P61968 AC112693.3-201ENST00000624819 1983 ntBASIC12.46□□□□□ -0.41
LMO4P61968 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
LMO4P61968 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
LMO4P61968 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC12.46□□□□□ -0.42
LMO4P61968 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
LMO4P61968 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC12.46□□□□□ -0.42
LMO4P61968 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
LMO4P61968 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
LMO4P61968 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
LMO4P61968 INE2-201ENST00000630399 1874 ntBASIC12.46□□□□□ -0.42
LMO4P61968 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
LMO4P61968 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
LMO4P61968 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
LMO4P61968 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
LMO4P61968 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
LMO4P61968 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC12.46□□□□□ -0.42
LMO4P61968 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC12.46□□□□□ -0.42
LMO4P61968 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
LMO4P61968 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
LMO4P61968 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
LMO4P61968 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
LMO4P61968 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
LMO4P61968 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
LMO4P61968 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
LMO4P61968 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
LMO4P61968 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC12.45□□□□□ -0.42
LMO4P61968 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
LMO4P61968 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC12.45□□□□□ -0.42
LMO4P61968 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
LMO4P61968 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC12.45□□□□□ -0.42
LMO4P61968 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms