Protein–RNA interactions for Protein: P61088

UBE2N, Ubiquitin-conjugating enzyme E2 N, humanhuman

Known RBP Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2NP61088 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
UBE2NP61088 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
UBE2NP61088 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
UBE2NP61088 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
UBE2NP61088 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC13.53□□□□□ -0.24
UBE2NP61088 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
UBE2NP61088 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
UBE2NP61088 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC13.53□□□□□ -0.24
UBE2NP61088 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
UBE2NP61088 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC13.53□□□□□ -0.24
UBE2NP61088 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC13.52□□□□□ -0.24
UBE2NP61088 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC13.52□□□□□ -0.24
UBE2NP61088 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC13.52□□□□□ -0.24
UBE2NP61088 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
UBE2NP61088 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC13.52□□□□□ -0.24
UBE2NP61088 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC13.52□□□□□ -0.24
UBE2NP61088 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC13.52□□□□□ -0.24
UBE2NP61088 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
UBE2NP61088 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
UBE2NP61088 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.25
UBE2NP61088 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
UBE2NP61088 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
UBE2NP61088 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
UBE2NP61088 AL512384.1-201ENST00000406683 331 ntBASIC13.52□□□□□ -0.25
UBE2NP61088 NME2P1-201ENST00000426182 414 ntBASIC13.52□□□□□ -0.25
UBE2NP61088 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
UBE2NP61088 INE1-201ENST00000456273 945 ntBASIC13.52□□□□□ -0.25
UBE2NP61088 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC13.52□□□□□ -0.25
UBE2NP61088 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
UBE2NP61088 AC004066.1-201ENST00000502488 802 ntBASIC13.52□□□□□ -0.25
UBE2NP61088 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
UBE2NP61088 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
UBE2NP61088 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC13.52□□□□□ -0.25
UBE2NP61088 CR383656.12-201ENST00000549567 513 ntBASIC13.52□□□□□ -0.25
UBE2NP61088 PAM16-204ENST00000571941 674 ntTSL 3 BASIC13.52□□□□□ -0.25
UBE2NP61088 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
UBE2NP61088 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
UBE2NP61088 HNRNPA1P48-201ENST00000562726 1377 ntBASIC13.52□□□□□ -0.25
UBE2NP61088 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC13.52□□□□□ -0.25
UBE2NP61088 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
UBE2NP61088 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.25
UBE2NP61088 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
UBE2NP61088 TMBIM7P-203ENST00000641617 1718 ntBASIC13.52□□□□□ -0.25
UBE2NP61088 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
UBE2NP61088 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
UBE2NP61088 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
UBE2NP61088 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC13.52□□□□□ -0.25
UBE2NP61088 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
UBE2NP61088 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
UBE2NP61088 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC13.52□□□□□ -0.25
UBE2NP61088 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
UBE2NP61088 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
UBE2NP61088 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
UBE2NP61088 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
UBE2NP61088 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
UBE2NP61088 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
UBE2NP61088 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
UBE2NP61088 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC13.51□□□□□ -0.25
UBE2NP61088 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
UBE2NP61088 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC13.51□□□□□ -0.25
UBE2NP61088 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
UBE2NP61088 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
UBE2NP61088 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
UBE2NP61088 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
UBE2NP61088 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
UBE2NP61088 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
UBE2NP61088 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
UBE2NP61088 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC13.51□□□□□ -0.25
UBE2NP61088 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
UBE2NP61088 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
UBE2NP61088 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
UBE2NP61088 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC13.51□□□□□ -0.25
UBE2NP61088 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
UBE2NP61088 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
UBE2NP61088 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC13.51□□□□□ -0.25
UBE2NP61088 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC13.51□□□□□ -0.25
UBE2NP61088 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC13.51□□□□□ -0.25
UBE2NP61088 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
UBE2NP61088 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
UBE2NP61088 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
UBE2NP61088 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
UBE2NP61088 AC063926.2-201ENST00000623766 1308 ntBASIC13.51□□□□□ -0.25
UBE2NP61088 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
UBE2NP61088 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
UBE2NP61088 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
UBE2NP61088 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
UBE2NP61088 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC13.51□□□□□ -0.25
UBE2NP61088 APOA1-205ENST00000375329 927 ntTSL 2 BASIC13.51□□□□□ -0.25
UBE2NP61088 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
UBE2NP61088 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC13.51□□□□□ -0.25
UBE2NP61088 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
UBE2NP61088 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC13.51□□□□□ -0.25
UBE2NP61088 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
UBE2NP61088 COX5BP8-201ENST00000416911 349 ntBASIC13.51□□□□□ -0.25
UBE2NP61088 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC13.51□□□□□ -0.25
UBE2NP61088 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC13.51□□□□□ -0.25
UBE2NP61088 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC13.51□□□□□ -0.25
UBE2NP61088 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
UBE2NP61088 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC13.51□□□□□ -0.25
UBE2NP61088 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC13.51□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 83.3 ms