Protein–RNA interactions for Protein: P56750

CLDN17, Claudin-17, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN17P56750 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC13.72□□□□□ -0.21
CLDN17P56750 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC13.72□□□□□ -0.21
CLDN17P56750 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC13.72□□□□□ -0.21
CLDN17P56750 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC13.72□□□□□ -0.21
CLDN17P56750 INO80C-210ENST00000590757 595 ntTSL 2 BASIC13.72□□□□□ -0.21
CLDN17P56750 BRI3BPP1-201ENST00000594224 787 ntBASIC13.72□□□□□ -0.21
CLDN17P56750 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC13.72□□□□□ -0.21
CLDN17P56750 AC107373.2-201ENST00000607735 490 ntBASIC13.72□□□□□ -0.21
CLDN17P56750 AL662799.1-202ENST00000614205 422 ntBASIC13.72□□□□□ -0.21
CLDN17P56750 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CLDN17P56750 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC13.72□□□□□ -0.21
CLDN17P56750 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC13.72□□□□□ -0.21
CLDN17P56750 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC13.72□□□□□ -0.21
CLDN17P56750 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC13.72□□□□□ -0.21
CLDN17P56750 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
CLDN17P56750 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
CLDN17P56750 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CLDN17P56750 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CLDN17P56750 TCAF2P1-201ENST00000291129 2421 ntBASIC13.72□□□□□ -0.21
CLDN17P56750 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CLDN17P56750 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CLDN17P56750 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
CLDN17P56750 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC13.72□□□□□ -0.21
CLDN17P56750 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC13.72□□□□□ -0.21
CLDN17P56750 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CLDN17P56750 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CLDN17P56750 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC13.71□□□□□ -0.21
CLDN17P56750 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CLDN17P56750 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CLDN17P56750 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CLDN17P56750 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CLDN17P56750 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CLDN17P56750 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
CLDN17P56750 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CLDN17P56750 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CLDN17P56750 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
CLDN17P56750 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CLDN17P56750 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC13.71□□□□□ -0.21
CLDN17P56750 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
CLDN17P56750 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CLDN17P56750 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CLDN17P56750 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CLDN17P56750 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CLDN17P56750 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC13.71□□□□□ -0.21
CLDN17P56750 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CLDN17P56750 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CLDN17P56750 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC13.71□□□□□ -0.21
CLDN17P56750 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC13.71□□□□□ -0.21
CLDN17P56750 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CLDN17P56750 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
CLDN17P56750 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CLDN17P56750 AC098850.1-201ENST00000419919 790 ntBASIC13.71□□□□□ -0.21
CLDN17P56750 AC134915.1-201ENST00000426461 574 ntBASIC13.71□□□□□ -0.21
CLDN17P56750 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC13.71□□□□□ -0.21
CLDN17P56750 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC13.71□□□□□ -0.21
CLDN17P56750 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC13.71□□□□□ -0.21
CLDN17P56750 AC190387.1-201ENST00000551683 408 ntBASIC13.71□□□□□ -0.21
CLDN17P56750 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC13.71□□□□□ -0.21
CLDN17P56750 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC13.71□□□□□ -0.21
CLDN17P56750 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC13.71□□□□□ -0.21
CLDN17P56750 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC13.71□□□□□ -0.21
CLDN17P56750 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC13.71□□□□□ -0.21
CLDN17P56750 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC13.71□□□□□ -0.21
CLDN17P56750 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC13.71□□□□□ -0.21
CLDN17P56750 ZBTB45P1-201ENST00000452761 1456 ntBASIC13.71□□□□□ -0.21
CLDN17P56750 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
CLDN17P56750 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CLDN17P56750 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CLDN17P56750 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC13.71□□□□□ -0.21
CLDN17P56750 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
CLDN17P56750 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC13.71□□□□□ -0.22
CLDN17P56750 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CLDN17P56750 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC13.71□□□□□ -0.22
CLDN17P56750 INTS4P2-202ENST00000614726 2019 ntBASIC13.71□□□□□ -0.22
CLDN17P56750 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.22
CLDN17P56750 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC13.71□□□□□ -0.22
CLDN17P56750 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.22
CLDN17P56750 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC13.71□□□□□ -0.22
CLDN17P56750 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC13.71□□□□□ -0.22
CLDN17P56750 MROH4P-201ENST00000431302 1578 ntBASIC13.71□□□□□ -0.22
CLDN17P56750 WASH3P-207ENST00000560956 1394 ntBASIC13.71□□□□□ -0.22
CLDN17P56750 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
CLDN17P56750 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
CLDN17P56750 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
CLDN17P56750 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
CLDN17P56750 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC13.7□□□□□ -0.22
CLDN17P56750 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC13.7□□□□□ -0.22
CLDN17P56750 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC13.7□□□□□ -0.22
CLDN17P56750 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC13.7□□□□□ -0.22
CLDN17P56750 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
CLDN17P56750 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CLDN17P56750 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CLDN17P56750 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC13.7□□□□□ -0.22
CLDN17P56750 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
CLDN17P56750 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CLDN17P56750 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CLDN17P56750 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CLDN17P56750 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
CLDN17P56750 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
CLDN17P56750 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms