Protein–RNA interactions for Protein: P51157

RAB28, Ras-related protein Rab-28, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28P51157 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
RAB28P51157 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RAB28P51157 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
RAB28P51157 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RAB28P51157 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
RAB28P51157 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RAB28P51157 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC14.78□□□□□ -0.04
RAB28P51157 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RAB28P51157 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RAB28P51157 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RAB28P51157 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RAB28P51157 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RAB28P51157 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RAB28P51157 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
RAB28P51157 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RAB28P51157 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RAB28P51157 AC018665.1-201ENST00000622927 1362 ntBASIC14.78□□□□□ -0.04
RAB28P51157 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RAB28P51157 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RAB28P51157 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
RAB28P51157 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RAB28P51157 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
RAB28P51157 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
RAB28P51157 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
RAB28P51157 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
RAB28P51157 GK-202ENST00000378941 458 ntTSL 3 BASIC14.78□□□□□ -0.04
RAB28P51157 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC14.78□□□□□ -0.04
RAB28P51157 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC14.78□□□□□ -0.04
RAB28P51157 HLA-K-203ENST00000430151 1046 ntBASIC14.78□□□□□ -0.04
RAB28P51157 KRT43P-201ENST00000434019 910 ntBASIC14.78□□□□□ -0.04
RAB28P51157 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC14.78□□□□□ -0.04
RAB28P51157 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RAB28P51157 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC14.78□□□□□ -0.04
RAB28P51157 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC14.78□□□□□ -0.04
RAB28P51157 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC14.78□□□□□ -0.04
RAB28P51157 AC106886.1-201ENST00000568660 600 ntBASIC14.78□□□□□ -0.04
RAB28P51157 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RAB28P51157 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC14.78□□□□□ -0.04
RAB28P51157 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC14.78□□□□□ -0.04
RAB28P51157 APOC4-201ENST00000591600 348 ntTSL 3 BASIC14.78□□□□□ -0.04
RAB28P51157 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC14.78□□□□□ -0.04
RAB28P51157 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC14.78□□□□□ -0.04
RAB28P51157 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC14.78□□□□□ -0.04
RAB28P51157 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RAB28P51157 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RAB28P51157 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
RAB28P51157 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC14.78□□□□□ -0.04
RAB28P51157 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
RAB28P51157 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
RAB28P51157 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC14.78□□□□□ -0.04
RAB28P51157 SLC9A7P1-202ENST00000556476 2239 ntBASIC14.78□□□□□ -0.04
RAB28P51157 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RAB28P51157 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
RAB28P51157 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC14.78□□□□□ -0.04
RAB28P51157 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RAB28P51157 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RAB28P51157 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC14.78□□□□□ -0.04
RAB28P51157 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
RAB28P51157 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
RAB28P51157 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
RAB28P51157 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
RAB28P51157 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC14.77□□□□□ -0.04
RAB28P51157 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RAB28P51157 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RAB28P51157 AL359258.3-201ENST00000622910 2331 ntBASIC14.77□□□□□ -0.04
RAB28P51157 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
RAB28P51157 LRRC59-203ENST00000576448 1531 ntBASIC14.77□□□□□ -0.04
RAB28P51157 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RAB28P51157 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC14.77□□□□□ -0.04
RAB28P51157 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC14.77□□□□□ -0.04
RAB28P51157 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RAB28P51157 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
RAB28P51157 AC063926.3-201ENST00000624734 5658 ntBASIC14.77□□□□□ -0.04
RAB28P51157 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC14.77□□□□□ -0.04
RAB28P51157 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
RAB28P51157 REXO1L5P-201ENST00000622260 2098 ntBASIC14.77□□□□□ -0.04
RAB28P51157 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
RAB28P51157 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
RAB28P51157 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RAB28P51157 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
RAB28P51157 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
RAB28P51157 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RAB28P51157 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RAB28P51157 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
RAB28P51157 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC14.77□□□□□ -0.05
RAB28P51157 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC14.77□□□□□ -0.05
RAB28P51157 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
RAB28P51157 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC14.77□□□□□ -0.05
RAB28P51157 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
RAB28P51157 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC14.77□□□□□ -0.05
RAB28P51157 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC14.77□□□□□ -0.05
RAB28P51157 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
RAB28P51157 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
RAB28P51157 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC14.77□□□□□ -0.05
RAB28P51157 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC14.77□□□□□ -0.05
RAB28P51157 AL603764.1-201ENST00000636452 321 ntBASIC14.77□□□□□ -0.05
RAB28P51157 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
RAB28P51157 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
RAB28P51157 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
RAB28P51157 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 65.6 ms