Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC14.34□□□□□ -0.11
RNF144AP50876 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
RNF144AP50876 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
RNF144AP50876 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
RNF144AP50876 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC14.34□□□□□ -0.11
RNF144AP50876 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC14.34□□□□□ -0.11
RNF144AP50876 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC14.34□□□□□ -0.11
RNF144AP50876 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC14.34□□□□□ -0.11
RNF144AP50876 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC14.34□□□□□ -0.11
RNF144AP50876 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
RNF144AP50876 AGAP7P-201ENST00000582299 2062 ntBASIC14.34□□□□□ -0.11
RNF144AP50876 AGAP14-201ENST00000624701 2060 ntBASIC14.34□□□□□ -0.11
RNF144AP50876 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RNF144AP50876 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RNF144AP50876 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC14.34□□□□□ -0.11
RNF144AP50876 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RNF144AP50876 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RNF144AP50876 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RNF144AP50876 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC14.34□□□□□ -0.11
RNF144AP50876 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RNF144AP50876 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RNF144AP50876 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC14.34□□□□□ -0.11
RNF144AP50876 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
RNF144AP50876 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RNF144AP50876 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
RNF144AP50876 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RNF144AP50876 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC14.34□□□□□ -0.11
RNF144AP50876 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC14.34□□□□□ -0.11
RNF144AP50876 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC14.34□□□□□ -0.11
RNF144AP50876 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC14.34□□□□□ -0.11
RNF144AP50876 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC14.34□□□□□ -0.11
RNF144AP50876 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC14.34□□□□□ -0.11
RNF144AP50876 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RNF144AP50876 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC14.34□□□□□ -0.11
RNF144AP50876 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC14.34□□□□□ -0.11
RNF144AP50876 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
RNF144AP50876 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RNF144AP50876 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RNF144AP50876 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RNF144AP50876 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RNF144AP50876 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RNF144AP50876 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
RNF144AP50876 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RNF144AP50876 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC14.33□□□□□ -0.11
RNF144AP50876 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
RNF144AP50876 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
RNF144AP50876 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
RNF144AP50876 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
RNF144AP50876 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
RNF144AP50876 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC14.33□□□□□ -0.11
RNF144AP50876 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
RNF144AP50876 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
RNF144AP50876 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
RNF144AP50876 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.11
RNF144AP50876 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RNF144AP50876 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
RNF144AP50876 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.12
RNF144AP50876 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
RNF144AP50876 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
RNF144AP50876 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RNF144AP50876 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC14.33□□□□□ -0.12
RNF144AP50876 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RNF144AP50876 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RNF144AP50876 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RNF144AP50876 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
RNF144AP50876 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
RNF144AP50876 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC14.33□□□□□ -0.12
RNF144AP50876 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RNF144AP50876 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RNF144AP50876 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
RNF144AP50876 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
RNF144AP50876 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC14.33□□□□□ -0.12
RNF144AP50876 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC14.33□□□□□ -0.12
RNF144AP50876 ATP6V1G1-201ENST00000374050 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RNF144AP50876 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
RNF144AP50876 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RNF144AP50876 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
RNF144AP50876 BASP1P1-201ENST00000430708 665 ntBASIC14.33□□□□□ -0.12
RNF144AP50876 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
RNF144AP50876 HNRNPA1P23-201ENST00000491091 1133 ntBASIC14.33□□□□□ -0.12
RNF144AP50876 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RNF144AP50876 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC14.33□□□□□ -0.12
RNF144AP50876 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC14.33□□□□□ -0.12
RNF144AP50876 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC14.33□□□□□ -0.12
RNF144AP50876 NAA60-208ENST00000570819 833 ntTSL 2 BASIC14.33□□□□□ -0.12
RNF144AP50876 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC14.33□□□□□ -0.12
RNF144AP50876 RN7SL121P-201ENST00000584223 273 ntBASIC14.33□□□□□ -0.12
RNF144AP50876 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC14.33□□□□□ -0.12
RNF144AP50876 UBL5-208ENST00000593087 320 ntTSL 3 BASIC14.33□□□□□ -0.12
RNF144AP50876 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC14.33□□□□□ -0.12
RNF144AP50876 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC14.33□□□□□ -0.12
RNF144AP50876 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC14.33□□□□□ -0.12
RNF144AP50876 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
RNF144AP50876 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RNF144AP50876 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
RNF144AP50876 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
RNF144AP50876 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
RNF144AP50876 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RNF144AP50876 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
RNF144AP50876 TDG-209ENST00000544861 1387 ntTSL 2 BASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms