Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC14.01□□□□□ -0.17
CENPAP49450 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC14.01□□□□□ -0.17
CENPAP49450 FAM45BP-202ENST00000592932 1624 ntBASIC14.01□□□□□ -0.17
CENPAP49450 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC14.01□□□□□ -0.17
CENPAP49450 BDKRB2-202ENST00000542454 6845 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CENPAP49450 ASXL1-201ENST00000306058 6591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CENPAP49450 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC14.01□□□□□ -0.17
CENPAP49450 PER3-208ENST00000613533 6318 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
CENPAP49450 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CENPAP49450 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC14.01□□□□□ -0.17
CENPAP49450 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC14.01□□□□□ -0.17
CENPAP49450 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CENPAP49450 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CENPAP49450 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC14.01□□□□□ -0.17
CENPAP49450 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CENPAP49450 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CENPAP49450 R3HDM2P2-201ENST00000401880 2116 ntBASIC14.01□□□□□ -0.17
CENPAP49450 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC14.01□□□□□ -0.17
CENPAP49450 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC14.01□□□□□ -0.17
CENPAP49450 NME4-207ENST00000450036 985 ntTSL 3 BASIC14.01□□□□□ -0.17
CENPAP49450 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC14.01□□□□□ -0.17
CENPAP49450 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CENPAP49450 AP000344.2-201ENST00000512987 629 ntBASIC14.01□□□□□ -0.17
CENPAP49450 DHDH-204ENST00000523250 634 ntTSL 5 BASIC14.01□□□□□ -0.17
CENPAP49450 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC14.01□□□□□ -0.17
CENPAP49450 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CENPAP49450 AC026150.2-201ENST00000564693 1156 ntBASIC14.01□□□□□ -0.17
CENPAP49450 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC14.01□□□□□ -0.17
CENPAP49450 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CENPAP49450 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC14.01□□□□□ -0.17
CENPAP49450 SYT12-201ENST00000393946 4534 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
CENPAP49450 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CENPAP49450 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CENPAP49450 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CENPAP49450 RAB18-208ENST00000611151 4931 ntTSL 5 BASIC14.01□□□□□ -0.17
CENPAP49450 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CENPAP49450 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CENPAP49450 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CENPAP49450 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC14.01□□□□□ -0.17
CENPAP49450 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CENPAP49450 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CENPAP49450 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC14.01□□□□□ -0.17
CENPAP49450 NCOR2-201ENST00000356219 7226 ntTSL 5 BASIC14.01□□□□□ -0.17
CENPAP49450 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CENPAP49450 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CENPAP49450 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
CENPAP49450 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC14□□□□□ -0.17
CENPAP49450 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
CENPAP49450 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CENPAP49450 FAM171B-201ENST00000304698 5826 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CENPAP49450 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CENPAP49450 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC14□□□□□ -0.17
CENPAP49450 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC14□□□□□ -0.17
CENPAP49450 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
CENPAP49450 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC14□□□□□ -0.17
CENPAP49450 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC14□□□□□ -0.17
CENPAP49450 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CENPAP49450 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CENPAP49450 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC14□□□□□ -0.17
CENPAP49450 NCOA7-203ENST00000392477 6457 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
CENPAP49450 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
CENPAP49450 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC14□□□□□ -0.17
CENPAP49450 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CENPAP49450 KPNA4-201ENST00000334256 8981 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CENPAP49450 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CENPAP49450 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC14□□□□□ -0.17
CENPAP49450 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
CENPAP49450 STOM-202ENST00000347359 870 ntTSL 2 BASIC14□□□□□ -0.17
CENPAP49450 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC14□□□□□ -0.17
CENPAP49450 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
CENPAP49450 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC14□□□□□ -0.17
CENPAP49450 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC14□□□□□ -0.17
CENPAP49450 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
CENPAP49450 COX10-202ENST00000429152 875 ntTSL 2 BASIC14□□□□□ -0.17
CENPAP49450 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC14□□□□□ -0.17
CENPAP49450 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC14□□□□□ -0.17
CENPAP49450 GATD1-206ENST00000526325 756 ntTSL 5 BASIC14□□□□□ -0.17
CENPAP49450 AC093520.2-201ENST00000561830 333 ntBASIC14□□□□□ -0.17
CENPAP49450 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CENPAP49450 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC14□□□□□ -0.17
CENPAP49450 MIR4453-201ENST00000584019 89 ntBASIC14□□□□□ -0.17
CENPAP49450 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC14□□□□□ -0.17
CENPAP49450 RN7SL828P-201ENST00000607615 303 ntBASIC14□□□□□ -0.17
CENPAP49450 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC14□□□□□ -0.17
CENPAP49450 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC14□□□□□ -0.17
CENPAP49450 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC14□□□□□ -0.17
CENPAP49450 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC14□□□□□ -0.17
CENPAP49450 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
CENPAP49450 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CENPAP49450 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CENPAP49450 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC14□□□□□ -0.17
CENPAP49450 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CENPAP49450 AC073957.3-201ENST00000609998 6758 ntBASIC14□□□□□ -0.17
CENPAP49450 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CENPAP49450 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC14□□□□□ -0.17
CENPAP49450 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC14□□□□□ -0.17
CENPAP49450 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC14□□□□□ -0.17
CENPAP49450 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC14□□□□□ -0.17
CENPAP49450 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC14□□□□□ -0.17
CENPAP49450 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 68.5 ms