Protein–RNA interactions for Protein: P48764

SLC9A3, Sodium/hydrogen exchanger 3, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC9A3P48764 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC14.16□□□□□ -0.14
SLC9A3P48764 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SLC9A3P48764 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC14.16□□□□□ -0.14
SLC9A3P48764 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
SLC9A3P48764 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
SLC9A3P48764 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SLC9A3P48764 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
SLC9A3P48764 WASH3P-207ENST00000560956 1394 ntBASIC14.16□□□□□ -0.14
SLC9A3P48764 FO538757.1-201ENST00000623083 1397 ntBASIC14.16□□□□□ -0.14
SLC9A3P48764 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SLC9A3P48764 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SLC9A3P48764 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SLC9A3P48764 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC14.16□□□□□ -0.14
SLC9A3P48764 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC14.16□□□□□ -0.14
SLC9A3P48764 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
SLC9A3P48764 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SLC9A3P48764 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SLC9A3P48764 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SLC9A3P48764 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
SLC9A3P48764 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
SLC9A3P48764 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
SLC9A3P48764 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
SLC9A3P48764 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
SLC9A3P48764 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
SLC9A3P48764 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
SLC9A3P48764 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SLC9A3P48764 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SLC9A3P48764 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SLC9A3P48764 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC14.15□□□□□ -0.14
SLC9A3P48764 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SLC9A3P48764 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SLC9A3P48764 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SLC9A3P48764 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SLC9A3P48764 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
SLC9A3P48764 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SLC9A3P48764 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SLC9A3P48764 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
SLC9A3P48764 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC14.15□□□□□ -0.14
SLC9A3P48764 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SLC9A3P48764 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SLC9A3P48764 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SLC9A3P48764 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SLC9A3P48764 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
SLC9A3P48764 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
SLC9A3P48764 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
SLC9A3P48764 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SLC9A3P48764 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SLC9A3P48764 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
SLC9A3P48764 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SLC9A3P48764 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC14.15□□□□□ -0.14
SLC9A3P48764 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC14.15□□□□□ -0.14
SLC9A3P48764 COX10-202ENST00000429152 875 ntTSL 2 BASIC14.15□□□□□ -0.14
SLC9A3P48764 MTND6P24-201ENST00000440466 518 ntBASIC14.15□□□□□ -0.14
SLC9A3P48764 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC14.15□□□□□ -0.14
SLC9A3P48764 AC023141.5-201ENST00000458585 616 ntBASIC14.15□□□□□ -0.14
SLC9A3P48764 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC14.15□□□□□ -0.14
SLC9A3P48764 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC14.15□□□□□ -0.14
SLC9A3P48764 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC14.15□□□□□ -0.14
SLC9A3P48764 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC14.15□□□□□ -0.14
SLC9A3P48764 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC14.15□□□□□ -0.14
SLC9A3P48764 RAB34-224ENST00000636513 888 ntTSL 5 BASIC14.15□□□□□ -0.14
SLC9A3P48764 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC14.15□□□□□ -0.14
SLC9A3P48764 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC14.15□□□□□ -0.14
SLC9A3P48764 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
SLC9A3P48764 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC14.15□□□□□ -0.14
SLC9A3P48764 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SLC9A3P48764 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SLC9A3P48764 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
SLC9A3P48764 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
SLC9A3P48764 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC14.15□□□□□ -0.14
SLC9A3P48764 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
SLC9A3P48764 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
SLC9A3P48764 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SLC9A3P48764 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
SLC9A3P48764 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
SLC9A3P48764 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
SLC9A3P48764 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC14.14□□□□□ -0.15
SLC9A3P48764 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
SLC9A3P48764 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SLC9A3P48764 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC14.14□□□□□ -0.15
SLC9A3P48764 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SLC9A3P48764 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SLC9A3P48764 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
SLC9A3P48764 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC14.14□□□□□ -0.15
SLC9A3P48764 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SLC9A3P48764 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
SLC9A3P48764 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
SLC9A3P48764 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC14.14□□□□□ -0.15
SLC9A3P48764 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SLC9A3P48764 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SLC9A3P48764 TARDBPP1-201ENST00000442013 1203 ntBASIC14.14□□□□□ -0.15
SLC9A3P48764 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC14.14□□□□□ -0.15
SLC9A3P48764 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC14.14□□□□□ -0.15
SLC9A3P48764 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SLC9A3P48764 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC14.14□□□□□ -0.15
SLC9A3P48764 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC14.14□□□□□ -0.15
SLC9A3P48764 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SLC9A3P48764 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC14.14□□□□□ -0.15
SLC9A3P48764 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SLC9A3P48764 AC010327.4-202ENST00000591484 748 ntBASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms