Protein–RNA interactions for Protein: P42830

CXCL5, C-X-C motif chemokine 5, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL5P42830 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
CXCL5P42830 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
CXCL5P42830 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC10.42□□□□□ -0.74
CXCL5P42830 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC10.42□□□□□ -0.74
CXCL5P42830 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
CXCL5P42830 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
CXCL5P42830 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
CXCL5P42830 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC10.42□□□□□ -0.74
CXCL5P42830 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
CXCL5P42830 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
CXCL5P42830 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
CXCL5P42830 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
CXCL5P42830 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC10.42□□□□□ -0.74
CXCL5P42830 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC10.42□□□□□ -0.74
CXCL5P42830 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC10.42□□□□□ -0.74
CXCL5P42830 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC10.42□□□□□ -0.74
CXCL5P42830 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
CXCL5P42830 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC10.42□□□□□ -0.74
CXCL5P42830 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
CXCL5P42830 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
CXCL5P42830 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
CXCL5P42830 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC10.42□□□□□ -0.74
CXCL5P42830 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC10.42□□□□□ -0.74
CXCL5P42830 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
CXCL5P42830 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC10.42□□□□□ -0.74
CXCL5P42830 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC10.42□□□□□ -0.74
CXCL5P42830 ACAP2-201ENST00000326793 7160 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
CXCL5P42830 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
CXCL5P42830 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
CXCL5P42830 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC10.42□□□□□ -0.74
CXCL5P42830 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC10.42□□□□□ -0.74
CXCL5P42830 AC136604.1-201ENST00000418535 575 ntBASIC10.42□□□□□ -0.74
CXCL5P42830 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC10.42□□□□□ -0.74
CXCL5P42830 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
CXCL5P42830 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC10.42□□□□□ -0.74
CXCL5P42830 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC10.42□□□□□ -0.74
CXCL5P42830 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
CXCL5P42830 AL662844.1-201ENST00000546340 181 ntBASIC10.42□□□□□ -0.74
CXCL5P42830 CD63-204ENST00000546939 779 ntTSL 3 BASIC10.42□□□□□ -0.74
CXCL5P42830 HNRNPUP1-201ENST00000554987 333 ntBASIC10.42□□□□□ -0.74
CXCL5P42830 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC10.42□□□□□ -0.74
CXCL5P42830 PDPK2P-202ENST00000562415 1191 ntBASIC10.42□□□□□ -0.74
CXCL5P42830 AP001005.1-201ENST00000571755 1248 ntBASIC10.42□□□□□ -0.74
CXCL5P42830 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC10.42□□□□□ -0.74
CXCL5P42830 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
CXCL5P42830 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
CXCL5P42830 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC10.42□□□□□ -0.74
CXCL5P42830 AC064836.3-201ENST00000607928 673 ntBASIC10.42□□□□□ -0.74
CXCL5P42830 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
CXCL5P42830 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
CXCL5P42830 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
CXCL5P42830 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
CXCL5P42830 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC10.42□□□□□ -0.74
CXCL5P42830 TNNI1-202ENST00000361379 5413 ntAPPRIS P2 TSL 5 BASIC10.42□□□□□ -0.74
CXCL5P42830 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
CXCL5P42830 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
CXCL5P42830 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
CXCL5P42830 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC10.42□□□□□ -0.74
CXCL5P42830 PRDM15-207ENST00000447207 4928 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
CXCL5P42830 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
CXCL5P42830 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
CXCL5P42830 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC10.42□□□□□ -0.74
CXCL5P42830 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
CXCL5P42830 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC10.42□□□□□ -0.74
CXCL5P42830 ZEB1-AS1-208ENST00000607166 2503 ntBASIC10.42□□□□□ -0.74
CXCL5P42830 EGR2-202ENST00000411732 2824 ntTSL 2 BASIC10.42□□□□□ -0.74
CXCL5P42830 AC118758.2-201ENST00000614242 2813 ntBASIC10.42□□□□□ -0.74
CXCL5P42830 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
CXCL5P42830 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
CXCL5P42830 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC10.42□□□□□ -0.74
CXCL5P42830 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC10.42□□□□□ -0.74
CXCL5P42830 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
CXCL5P42830 NCOR2-201ENST00000356219 7226 ntTSL 5 BASIC10.42□□□□□ -0.74
CXCL5P42830 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
CXCL5P42830 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
CXCL5P42830 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC10.41□□□□□ -0.74
CXCL5P42830 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
CXCL5P42830 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
CXCL5P42830 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
CXCL5P42830 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC10.41□□□□□ -0.74
CXCL5P42830 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
CXCL5P42830 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
CXCL5P42830 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC10.41□□□□□ -0.74
CXCL5P42830 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC10.41□□□□□ -0.74
CXCL5P42830 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
CXCL5P42830 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC10.41□□□□□ -0.74
CXCL5P42830 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC10.41□□□□□ -0.74
CXCL5P42830 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC10.41□□□□□ -0.74
CXCL5P42830 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC10.41□□□□□ -0.74
CXCL5P42830 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
CXCL5P42830 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
CXCL5P42830 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
CXCL5P42830 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC10.41□□□□□ -0.74
CXCL5P42830 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
CXCL5P42830 CEP68-202ENST00000377990 5847 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
CXCL5P42830 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC10.41□□□□□ -0.74
CXCL5P42830 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
CXCL5P42830 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
CXCL5P42830 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
CXCL5P42830 GALC-206ENST00000544807 2528 ntTSL 2 BASIC10.41□□□□□ -0.74
Retrieved 100 of 98,524 protein–RNA pairs in 66.1 ms