Protein–RNA interactions for Protein: P41219

PRPH, Peripherin, humanhuman

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPHP41219 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC17.32■□□□□ 0.36
PRPHP41219 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC17.32■□□□□ 0.36
PRPHP41219 MYCLP2-201ENST00000449268 967 ntBASIC17.32■□□□□ 0.36
PRPHP41219 GALT-202ENST00000450095 1280 ntTSL 2 BASIC17.32■□□□□ 0.36
PRPHP41219 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC17.32■□□□□ 0.36
PRPHP41219 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC17.32■□□□□ 0.36
PRPHP41219 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC17.32■□□□□ 0.36
PRPHP41219 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC17.32■□□□□ 0.36
PRPHP41219 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC17.32■□□□□ 0.36
PRPHP41219 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PRPHP41219 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
PRPHP41219 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
PRPHP41219 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PRPHP41219 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC17.32■□□□□ 0.36
PRPHP41219 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC17.32■□□□□ 0.36
PRPHP41219 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
PRPHP41219 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
PRPHP41219 AC013726.1-201ENST00000563747 2285 ntBASIC17.32■□□□□ 0.36
PRPHP41219 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PRPHP41219 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PRPHP41219 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PRPHP41219 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
PRPHP41219 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
PRPHP41219 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC17.31■□□□□ 0.36
PRPHP41219 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC17.31■□□□□ 0.36
PRPHP41219 AJ011931.1-201ENST00000618749 2492 ntBASIC17.31■□□□□ 0.36
PRPHP41219 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PRPHP41219 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PRPHP41219 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
PRPHP41219 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PRPHP41219 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
PRPHP41219 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PRPHP41219 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
PRPHP41219 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PRPHP41219 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC17.31■□□□□ 0.36
PRPHP41219 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC17.31■□□□□ 0.36
PRPHP41219 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
PRPHP41219 HLA-K-203ENST00000430151 1046 ntBASIC17.31■□□□□ 0.36
PRPHP41219 HMGN1P19-201ENST00000436976 333 ntBASIC17.31■□□□□ 0.36
PRPHP41219 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC17.31■□□□□ 0.36
PRPHP41219 ELK1P1-201ENST00000485699 580 ntBASIC17.31■□□□□ 0.36
PRPHP41219 TERF1P3-201ENST00000505638 1227 ntBASIC17.31■□□□□ 0.36
PRPHP41219 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC17.31■□□□□ 0.36
PRPHP41219 AL359711.2-201ENST00000563105 872 ntBASIC17.31■□□□□ 0.36
PRPHP41219 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC17.31■□□□□ 0.36
PRPHP41219 AC140912.1-201ENST00000577171 1054 ntBASIC17.31■□□□□ 0.36
PRPHP41219 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC17.31■□□□□ 0.36
PRPHP41219 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC17.31■□□□□ 0.36
PRPHP41219 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PRPHP41219 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PRPHP41219 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PRPHP41219 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PRPHP41219 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
PRPHP41219 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
PRPHP41219 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PRPHP41219 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
PRPHP41219 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC17.31■□□□□ 0.36
PRPHP41219 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC17.31■□□□□ 0.36
PRPHP41219 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
PRPHP41219 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
PRPHP41219 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PRPHP41219 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC17.31■□□□□ 0.36
PRPHP41219 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC17.3■□□□□ 0.36
PRPHP41219 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PRPHP41219 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC17.3■□□□□ 0.36
PRPHP41219 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PRPHP41219 LILRP1-201ENST00000444199 1370 ntBASIC17.3■□□□□ 0.36
PRPHP41219 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PRPHP41219 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
PRPHP41219 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
PRPHP41219 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
PRPHP41219 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PRPHP41219 AL359258.3-201ENST00000622910 2331 ntBASIC17.3■□□□□ 0.36
PRPHP41219 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
PRPHP41219 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
PRPHP41219 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PRPHP41219 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
PRPHP41219 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PRPHP41219 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PRPHP41219 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
PRPHP41219 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC17.3■□□□□ 0.36
PRPHP41219 SOCS2P1-201ENST00000417727 557 ntBASIC17.3■□□□□ 0.36
PRPHP41219 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC17.3■□□□□ 0.36
PRPHP41219 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC17.3■□□□□ 0.36
PRPHP41219 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC17.3■□□□□ 0.36
PRPHP41219 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC17.3■□□□□ 0.36
PRPHP41219 AC190387.1-201ENST00000551683 408 ntBASIC17.3■□□□□ 0.36
PRPHP41219 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC17.3■□□□□ 0.36
PRPHP41219 BX539320.1-201ENST00000623759 877 ntBASIC17.3■□□□□ 0.36
PRPHP41219 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC17.3■□□□□ 0.36
PRPHP41219 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PRPHP41219 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PRPHP41219 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
PRPHP41219 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
PRPHP41219 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PRPHP41219 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PRPHP41219 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PRPHP41219 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
PRPHP41219 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
PRPHP41219 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 64.1 ms