Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RFC1P35251 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RFC1P35251 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RFC1P35251 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC16.2■□□□□ 0.18
RFC1P35251 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RFC1P35251 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RFC1P35251 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RFC1P35251 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RFC1P35251 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RFC1P35251 SYS1-203ENST00000414310 795 ntTSL 3 BASIC16.2■□□□□ 0.18
RFC1P35251 RN7SL399P-201ENST00000471648 279 ntBASIC16.2■□□□□ 0.18
RFC1P35251 FAM86LP-201ENST00000478302 853 ntBASIC16.2■□□□□ 0.18
RFC1P35251 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC16.2■□□□□ 0.18
RFC1P35251 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC16.2■□□□□ 0.18
RFC1P35251 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC16.2■□□□□ 0.18
RFC1P35251 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC16.2■□□□□ 0.18
RFC1P35251 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RFC1P35251 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC16.2■□□□□ 0.18
RFC1P35251 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC16.2■□□□□ 0.18
RFC1P35251 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC16.2■□□□□ 0.18
RFC1P35251 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
RFC1P35251 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RFC1P35251 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC16.2■□□□□ 0.18
RFC1P35251 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RFC1P35251 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RFC1P35251 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
RFC1P35251 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RFC1P35251 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RFC1P35251 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RFC1P35251 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
RFC1P35251 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
RFC1P35251 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RFC1P35251 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
RFC1P35251 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
RFC1P35251 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
RFC1P35251 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
RFC1P35251 REXO1L4P-201ENST00000605109 1937 ntBASIC16.19■□□□□ 0.18
RFC1P35251 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RFC1P35251 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RFC1P35251 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
RFC1P35251 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RFC1P35251 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
RFC1P35251 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
RFC1P35251 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RFC1P35251 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RFC1P35251 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RFC1P35251 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RFC1P35251 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
RFC1P35251 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RFC1P35251 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RFC1P35251 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC16.19■□□□□ 0.18
RFC1P35251 SPTLC1P1-201ENST00000447199 261 ntBASIC16.19■□□□□ 0.18
RFC1P35251 CD81-207ENST00000481687 890 ntTSL 2 BASIC16.19■□□□□ 0.18
RFC1P35251 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RFC1P35251 GAPDHP40-201ENST00000505218 1006 ntBASIC16.19■□□□□ 0.18
RFC1P35251 SERBP1P5-201ENST00000510079 1181 ntBASIC16.19■□□□□ 0.18
RFC1P35251 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC16.19■□□□□ 0.18
RFC1P35251 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RFC1P35251 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RFC1P35251 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC16.19■□□□□ 0.18
RFC1P35251 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
RFC1P35251 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC16.19■□□□□ 0.18
RFC1P35251 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC16.19■□□□□ 0.18
RFC1P35251 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
RFC1P35251 AJ011932.1-201ENST00000621707 465 ntBASIC16.19■□□□□ 0.18
RFC1P35251 CICP24-201ENST00000605464 2705 ntBASIC16.19■□□□□ 0.18
RFC1P35251 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RFC1P35251 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC16.19■□□□□ 0.18
RFC1P35251 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
RFC1P35251 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
RFC1P35251 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
RFC1P35251 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC16.19■□□□□ 0.18
RFC1P35251 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC16.19■□□□□ 0.18
RFC1P35251 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC16.19■□□□□ 0.18
RFC1P35251 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RFC1P35251 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC16.19■□□□□ 0.18
RFC1P35251 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RFC1P35251 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC16.19■□□□□ 0.18
RFC1P35251 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
RFC1P35251 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RFC1P35251 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC16.19■□□□□ 0.18
RFC1P35251 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RFC1P35251 PCDHGB8P-201ENST00000502926 1973 ntBASIC16.18■□□□□ 0.18
RFC1P35251 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RFC1P35251 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RFC1P35251 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RFC1P35251 SLC9A7P1-202ENST00000556476 2239 ntBASIC16.18■□□□□ 0.18
RFC1P35251 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
RFC1P35251 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RFC1P35251 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC16.18■□□□□ 0.18
RFC1P35251 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
RFC1P35251 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RFC1P35251 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RFC1P35251 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RFC1P35251 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RFC1P35251 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC16.18■□□□□ 0.18
RFC1P35251 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RFC1P35251 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RFC1P35251 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RFC1P35251 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms