Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
RAB4AP20338 AC073508.3-201ENST00000619697 1419 ntBASIC11.86□□□□□ -0.51
RAB4AP20338 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
RAB4AP20338 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
RAB4AP20338 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC11.85□□□□□ -0.51
RAB4AP20338 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
RAB4AP20338 CLCNKB-202ENST00000375679 2567 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
RAB4AP20338 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
RAB4AP20338 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC11.85□□□□□ -0.51
RAB4AP20338 GFRA1-203ENST00000369236 9109 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
RAB4AP20338 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
RAB4AP20338 OPA3-201ENST00000263275 7828 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
RAB4AP20338 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
RAB4AP20338 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC11.85□□□□□ -0.51
RAB4AP20338 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
RAB4AP20338 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC11.85□□□□□ -0.51
RAB4AP20338 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC11.85□□□□□ -0.51
RAB4AP20338 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
RAB4AP20338 MOGAT3-201ENST00000223114 2132 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
RAB4AP20338 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
RAB4AP20338 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
RAB4AP20338 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
RAB4AP20338 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
RAB4AP20338 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
RAB4AP20338 MEAF6-204ENST00000373075 2147 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
RAB4AP20338 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
RAB4AP20338 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC11.85□□□□□ -0.51
RAB4AP20338 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC11.85□□□□□ -0.51
RAB4AP20338 PMS2P1-201ENST00000431037 1228 ntBASIC11.85□□□□□ -0.51
RAB4AP20338 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
RAB4AP20338 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC11.85□□□□□ -0.51
RAB4AP20338 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC11.85□□□□□ -0.51
RAB4AP20338 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC11.85□□□□□ -0.51
RAB4AP20338 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
RAB4AP20338 AP001350.2-201ENST00000625104 1094 ntBASIC11.85□□□□□ -0.51
RAB4AP20338 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC11.85□□□□□ -0.51
RAB4AP20338 LDB3-205ENST00000429277 5436 ntTSL 2 BASIC11.85□□□□□ -0.51
RAB4AP20338 RP1-207ENST00000637698 6177 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
RAB4AP20338 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC11.85□□□□□ -0.51
RAB4AP20338 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
RAB4AP20338 AC019294.4-201ENST00000561777 2905 ntBASIC11.85□□□□□ -0.51
RAB4AP20338 DENND4C-205ENST00000434457 6718 ntTSL 5 BASIC11.85□□□□□ -0.51
RAB4AP20338 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
RAB4AP20338 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC11.85□□□□□ -0.51
RAB4AP20338 GPR179-204ENST00000621958 7983 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
RAB4AP20338 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
RAB4AP20338 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
RAB4AP20338 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC11.85□□□□□ -0.51
RAB4AP20338 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
RAB4AP20338 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC11.85□□□□□ -0.51
RAB4AP20338 U82695.1-201ENST00000635752 1889 ntBASIC11.85□□□□□ -0.51
RAB4AP20338 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
RAB4AP20338 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC11.85□□□□□ -0.51
RAB4AP20338 GRIPAP1-215ENST00000622599 2881 ntTSL 5 BASIC11.85□□□□□ -0.51
RAB4AP20338 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC11.84□□□□□ -0.51
RAB4AP20338 CPT1C-204ENST00000405931 2785 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
RAB4AP20338 NRXN1-259ENST00000637511 3651 ntTSL 5 BASIC11.84□□□□□ -0.51
RAB4AP20338 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
RAB4AP20338 SLC22A20-204ENST00000530038 1673 ntBASIC11.84□□□□□ -0.51
RAB4AP20338 COL2A1-201ENST00000337299 4257 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
RAB4AP20338 FNTB-201ENST00000246166 2834 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
RAB4AP20338 SLC5A11-202ENST00000424767 2399 ntTSL 2 BASIC11.84□□□□□ -0.51
RAB4AP20338 BIRC5-201ENST00000301633 2711 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
RAB4AP20338 CACUL1-201ENST00000369151 11311 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
RAB4AP20338 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC11.84□□□□□ -0.51
RAB4AP20338 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
RAB4AP20338 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC11.84□□□□□ -0.51
RAB4AP20338 HSPA2-201ENST00000247207 2767 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
RAB4AP20338 TRPC6-201ENST00000344327 4612 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
RAB4AP20338 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC11.84□□□□□ -0.51
RAB4AP20338 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
RAB4AP20338 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
RAB4AP20338 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC11.84□□□□□ -0.51
RAB4AP20338 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
RAB4AP20338 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
RAB4AP20338 PRYP5-201ENST00000451909 266 ntBASIC11.84□□□□□ -0.51
RAB4AP20338 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
RAB4AP20338 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC11.84□□□□□ -0.51
RAB4AP20338 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC11.84□□□□□ -0.51
RAB4AP20338 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC11.84□□□□□ -0.51
RAB4AP20338 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC11.84□□□□□ -0.51
RAB4AP20338 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC11.84□□□□□ -0.51
RAB4AP20338 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC11.84□□□□□ -0.51
RAB4AP20338 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC11.84□□□□□ -0.51
RAB4AP20338 RPS15-207ENST00000591032 550 ntTSL 3 BASIC11.84□□□□□ -0.51
RAB4AP20338 RPS15-212ENST00000593052 629 ntTSL 2 BASIC11.84□□□□□ -0.51
RAB4AP20338 BNIP3P18-201ENST00000593976 575 ntBASIC11.84□□□□□ -0.51
RAB4AP20338 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC11.84□□□□□ -0.51
RAB4AP20338 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC11.84□□□□□ -0.51
RAB4AP20338 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
RAB4AP20338 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC11.84□□□□□ -0.51
RAB4AP20338 FANCC-201ENST00000289081 4585 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
RAB4AP20338 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
RAB4AP20338 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC11.84□□□□□ -0.51
RAB4AP20338 SPTB-203ENST00000389721 6705 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
RAB4AP20338 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC11.84□□□□□ -0.51
RAB4AP20338 AKAP13-202ENST00000394510 9128 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
RAB4AP20338 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
RAB4AP20338 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
RAB4AP20338 NCF1C-201ENST00000438382 1427 ntBASIC11.84□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms