Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TNFRSF1BP20333 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TNFRSF1BP20333 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
TNFRSF1BP20333 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TNFRSF1BP20333 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TNFRSF1BP20333 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TNFRSF1BP20333 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TNFRSF1BP20333 AMT-204ENST00000427987 1646 ntTSL 5 BASIC14.3□□□□□ -0.12
TNFRSF1BP20333 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC14.3□□□□□ -0.12
TNFRSF1BP20333 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
TNFRSF1BP20333 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
TNFRSF1BP20333 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TNFRSF1BP20333 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
TNFRSF1BP20333 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC14.3□□□□□ -0.12
TNFRSF1BP20333 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
TNFRSF1BP20333 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
TNFRSF1BP20333 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
TNFRSF1BP20333 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TNFRSF1BP20333 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TNFRSF1BP20333 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TNFRSF1BP20333 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TNFRSF1BP20333 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC14.3□□□□□ -0.12
TNFRSF1BP20333 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC14.3□□□□□ -0.12
TNFRSF1BP20333 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC14.3□□□□□ -0.12
TNFRSF1BP20333 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC14.3□□□□□ -0.12
TNFRSF1BP20333 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TNFRSF1BP20333 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
TNFRSF1BP20333 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TNFRSF1BP20333 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TNFRSF1BP20333 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TNFRSF1BP20333 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TNFRSF1BP20333 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC14.3□□□□□ -0.12
TNFRSF1BP20333 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC14.3□□□□□ -0.12
TNFRSF1BP20333 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC14.3□□□□□ -0.12
TNFRSF1BP20333 AL080243.2-201ENST00000418783 582 ntBASIC14.3□□□□□ -0.12
TNFRSF1BP20333 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC14.3□□□□□ -0.12
TNFRSF1BP20333 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC14.3□□□□□ -0.12
TNFRSF1BP20333 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
TNFRSF1BP20333 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
TNFRSF1BP20333 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC14.3□□□□□ -0.12
TNFRSF1BP20333 PRR29-209ENST00000582540 967 ntTSL 2 BASIC14.3□□□□□ -0.12
TNFRSF1BP20333 LINC01115-203ENST00000606068 577 ntBASIC14.3□□□□□ -0.12
TNFRSF1BP20333 AC025181.2-201ENST00000606994 802 ntBASIC14.3□□□□□ -0.12
TNFRSF1BP20333 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC14.3□□□□□ -0.12
TNFRSF1BP20333 LINC00628-201ENST00000628516 1289 ntBASIC14.3□□□□□ -0.12
TNFRSF1BP20333 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC14.3□□□□□ -0.12
TNFRSF1BP20333 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC14.3□□□□□ -0.12
TNFRSF1BP20333 AL035456.1-201ENST00000456064 1369 ntBASIC14.3□□□□□ -0.12
TNFRSF1BP20333 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC14.3□□□□□ -0.12
TNFRSF1BP20333 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TNFRSF1BP20333 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TNFRSF1BP20333 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TNFRSF1BP20333 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TNFRSF1BP20333 TK1-203ENST00000588734 1681 ntTSL 2 BASIC14.3□□□□□ -0.12
TNFRSF1BP20333 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
TNFRSF1BP20333 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TNFRSF1BP20333 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC14.29□□□□□ -0.12
TNFRSF1BP20333 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TNFRSF1BP20333 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC14.29□□□□□ -0.12
TNFRSF1BP20333 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TNFRSF1BP20333 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
TNFRSF1BP20333 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC14.29□□□□□ -0.12
TNFRSF1BP20333 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC14.29□□□□□ -0.12
TNFRSF1BP20333 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC14.29□□□□□ -0.12
TNFRSF1BP20333 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TNFRSF1BP20333 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TNFRSF1BP20333 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TNFRSF1BP20333 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TNFRSF1BP20333 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TNFRSF1BP20333 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TNFRSF1BP20333 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TNFRSF1BP20333 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC14.29□□□□□ -0.12
TNFRSF1BP20333 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TNFRSF1BP20333 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
TNFRSF1BP20333 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TNFRSF1BP20333 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC14.29□□□□□ -0.12
TNFRSF1BP20333 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC14.29□□□□□ -0.12
TNFRSF1BP20333 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TNFRSF1BP20333 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC14.29□□□□□ -0.12
TNFRSF1BP20333 SATB1-217ENST00000493952 626 ntTSL 3 BASIC14.29□□□□□ -0.12
TNFRSF1BP20333 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC14.29□□□□□ -0.12
TNFRSF1BP20333 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC14.29□□□□□ -0.12
TNFRSF1BP20333 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TNFRSF1BP20333 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC14.29□□□□□ -0.12
TNFRSF1BP20333 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TNFRSF1BP20333 AC025048.3-201ENST00000590609 569 ntBASIC14.29□□□□□ -0.12
TNFRSF1BP20333 AC010327.4-202ENST00000591484 748 ntBASIC14.29□□□□□ -0.12
TNFRSF1BP20333 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TNFRSF1BP20333 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
TNFRSF1BP20333 AC005702.4-201ENST00000618393 416 ntBASIC14.29□□□□□ -0.12
TNFRSF1BP20333 AC009093.7-201ENST00000623853 1223 ntBASIC14.29□□□□□ -0.12
TNFRSF1BP20333 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
TNFRSF1BP20333 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TNFRSF1BP20333 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TNFRSF1BP20333 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TNFRSF1BP20333 TP73-209ENST00000603362 1668 ntTSL 5 BASIC14.29□□□□□ -0.12
TNFRSF1BP20333 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TNFRSF1BP20333 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC14.29□□□□□ -0.12
TNFRSF1BP20333 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC14.29□□□□□ -0.12
TNFRSF1BP20333 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms