Protein–RNA interactions for Protein: P0C6S8

LINGO3, Leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINGO3P0C6S8 GATB-205ENST00000508611 605 ntTSL 2 BASIC14.94□□□□□ -0.02
LINGO3P0C6S8 PRYP6-201ENST00000514804 343 ntBASIC14.94□□□□□ -0.02
LINGO3P0C6S8 KRT8P48-201ENST00000515599 1220 ntBASIC14.94□□□□□ -0.02
LINGO3P0C6S8 DHDH-204ENST00000523250 634 ntTSL 5 BASIC14.94□□□□□ -0.02
LINGO3P0C6S8 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LINGO3P0C6S8 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
LINGO3P0C6S8 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
LINGO3P0C6S8 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
LINGO3P0C6S8 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC14.94□□□□□ -0.02
LINGO3P0C6S8 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC14.94□□□□□ -0.02
LINGO3P0C6S8 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC14.94□□□□□ -0.02
LINGO3P0C6S8 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
LINGO3P0C6S8 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LINGO3P0C6S8 INTS4P1-203ENST00000641008 3683 ntBASIC14.94□□□□□ -0.02
LINGO3P0C6S8 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
LINGO3P0C6S8 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC14.94□□□□□ -0.02
LINGO3P0C6S8 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
LINGO3P0C6S8 STAT4-202ENST00000392320 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LINGO3P0C6S8 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
LINGO3P0C6S8 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
LINGO3P0C6S8 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LINGO3P0C6S8 CD300LB-202ENST00000392621 2286 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
LINGO3P0C6S8 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LINGO3P0C6S8 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
LINGO3P0C6S8 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC14.93□□□□□ -0.02
LINGO3P0C6S8 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LINGO3P0C6S8 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC14.93□□□□□ -0.02
LINGO3P0C6S8 SCARB2-227ENST00000640957 3255 ntAPPRIS ALT1 TSL 5 BASIC14.93□□□□□ -0.02
LINGO3P0C6S8 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LINGO3P0C6S8 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
LINGO3P0C6S8 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
LINGO3P0C6S8 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC14.93□□□□□ -0.02
LINGO3P0C6S8 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
LINGO3P0C6S8 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
LINGO3P0C6S8 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
LINGO3P0C6S8 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LINGO3P0C6S8 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC14.93□□□□□ -0.02
LINGO3P0C6S8 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC14.93□□□□□ -0.02
LINGO3P0C6S8 HECTD3-202ENST00000372172 3610 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
LINGO3P0C6S8 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
LINGO3P0C6S8 PLCD4-202ENST00000417849 2738 ntAPPRIS P2 TSL 5 BASIC14.93□□□□□ -0.02
LINGO3P0C6S8 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LINGO3P0C6S8 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
LINGO3P0C6S8 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LINGO3P0C6S8 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LINGO3P0C6S8 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC14.93□□□□□ -0.02
LINGO3P0C6S8 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC14.93□□□□□ -0.02
LINGO3P0C6S8 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC14.93□□□□□ -0.02
LINGO3P0C6S8 SPDYE11-202ENST00000450699 704 ntBASIC14.93□□□□□ -0.02
LINGO3P0C6S8 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
LINGO3P0C6S8 AC079140.1-201ENST00000508039 487 ntBASIC14.93□□□□□ -0.02
LINGO3P0C6S8 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC14.93□□□□□ -0.02
LINGO3P0C6S8 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC14.93□□□□□ -0.02
LINGO3P0C6S8 SPDYE9P-201ENST00000570642 692 ntBASIC14.93□□□□□ -0.02
LINGO3P0C6S8 SPDYE10P-202ENST00000612005 668 ntBASIC14.93□□□□□ -0.02
LINGO3P0C6S8 SPDYE8P-202ENST00000612377 668 ntBASIC14.93□□□□□ -0.02
LINGO3P0C6S8 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC14.93□□□□□ -0.02
LINGO3P0C6S8 HADH-212ENST00000638621 741 ntTSL 5 BASIC14.93□□□□□ -0.02
LINGO3P0C6S8 PIAS1-202ENST00000545237 2932 ntTSL 2 BASIC14.93□□□□□ -0.02
LINGO3P0C6S8 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LINGO3P0C6S8 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
LINGO3P0C6S8 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
LINGO3P0C6S8 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC14.93□□□□□ -0.02
LINGO3P0C6S8 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
LINGO3P0C6S8 AMT-221ENST00000538581 2038 ntTSL 2 BASIC14.93□□□□□ -0.02
LINGO3P0C6S8 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LINGO3P0C6S8 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
LINGO3P0C6S8 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC14.93□□□□□ -0.02
LINGO3P0C6S8 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC14.93□□□□□ -0.02
LINGO3P0C6S8 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC14.93□□□□□ -0.02
LINGO3P0C6S8 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
LINGO3P0C6S8 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LINGO3P0C6S8 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC14.93□□□□□ -0.02
LINGO3P0C6S8 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LINGO3P0C6S8 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
LINGO3P0C6S8 OTP-201ENST00000306422 3669 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LINGO3P0C6S8 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
LINGO3P0C6S8 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC14.92□□□□□ -0.02
LINGO3P0C6S8 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
LINGO3P0C6S8 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LINGO3P0C6S8 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
LINGO3P0C6S8 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
LINGO3P0C6S8 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LINGO3P0C6S8 ACTR2-202ENST00000377982 2685 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
LINGO3P0C6S8 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LINGO3P0C6S8 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC14.92□□□□□ -0.02
LINGO3P0C6S8 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC14.92□□□□□ -0.02
LINGO3P0C6S8 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LINGO3P0C6S8 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
LINGO3P0C6S8 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC14.92□□□□□ -0.02
LINGO3P0C6S8 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LINGO3P0C6S8 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC14.92□□□□□ -0.02
LINGO3P0C6S8 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
LINGO3P0C6S8 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC14.92□□□□□ -0.02
LINGO3P0C6S8 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
LINGO3P0C6S8 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
LINGO3P0C6S8 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC14.92□□□□□ -0.02
LINGO3P0C6S8 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
LINGO3P0C6S8 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
LINGO3P0C6S8 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 64.1 ms