Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TIMP1P01033 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TIMP1P01033 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
TIMP1P01033 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC16.28■□□□□ 0.2
TIMP1P01033 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TIMP1P01033 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TIMP1P01033 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TIMP1P01033 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
TIMP1P01033 RAN-210ENST00000541630 1475 ntTSL 2 BASIC16.28■□□□□ 0.2
TIMP1P01033 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TIMP1P01033 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TIMP1P01033 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
TIMP1P01033 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TIMP1P01033 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TIMP1P01033 MIR22HG-201ENST00000334146 1383 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TIMP1P01033 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TIMP1P01033 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
TIMP1P01033 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TIMP1P01033 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TIMP1P01033 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.2
TIMP1P01033 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TIMP1P01033 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
TIMP1P01033 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC16.27■□□□□ 0.2
TIMP1P01033 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC16.27■□□□□ 0.2
TIMP1P01033 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
TIMP1P01033 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC16.27■□□□□ 0.2
TIMP1P01033 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TIMP1P01033 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
TIMP1P01033 AC006449.5-201ENST00000610658 2098 ntBASIC16.27■□□□□ 0.2
TIMP1P01033 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TIMP1P01033 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
TIMP1P01033 PPA2-204ENST00000354147 667 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TIMP1P01033 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
TIMP1P01033 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC16.27■□□□□ 0.2
TIMP1P01033 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC16.27■□□□□ 0.2
TIMP1P01033 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC16.27■□□□□ 0.2
TIMP1P01033 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TIMP1P01033 PPA2-205ENST00000432483 859 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TIMP1P01033 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
TIMP1P01033 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC16.27■□□□□ 0.2
TIMP1P01033 RPL18AP3-201ENST00000462885 528 ntBASIC16.27■□□□□ 0.2
TIMP1P01033 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TIMP1P01033 ANXA5-210ENST00000515017 1190 ntTSL 5 BASIC16.27■□□□□ 0.2
TIMP1P01033 ORAOV1-209ENST00000538554 1000 ntTSL 2 BASIC16.27■□□□□ 0.2
TIMP1P01033 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC16.27■□□□□ 0.2
TIMP1P01033 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
TIMP1P01033 AC008687.1-201ENST00000591656 786 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
TIMP1P01033 SLC27A5-204ENST00000594786 643 ntTSL 2 BASIC16.27■□□□□ 0.2
TIMP1P01033 SIGLEC18P-201ENST00000602271 909 ntBASIC16.27■□□□□ 0.2
TIMP1P01033 AC087392.5-201ENST00000612517 489 ntBASIC16.27■□□□□ 0.2
TIMP1P01033 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TIMP1P01033 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TIMP1P01033 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC16.27■□□□□ 0.2
TIMP1P01033 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC16.27■□□□□ 0.2
TIMP1P01033 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
TIMP1P01033 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
TIMP1P01033 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC16.27■□□□□ 0.19
TIMP1P01033 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TIMP1P01033 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TIMP1P01033 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TIMP1P01033 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC16.27■□□□□ 0.19
TIMP1P01033 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
TIMP1P01033 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TIMP1P01033 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TIMP1P01033 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TIMP1P01033 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TIMP1P01033 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TIMP1P01033 AC015909.3-201ENST00000572855 1794 ntBASIC16.26■□□□□ 0.19
TIMP1P01033 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TIMP1P01033 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TIMP1P01033 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC16.26■□□□□ 0.19
TIMP1P01033 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TIMP1P01033 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TIMP1P01033 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
TIMP1P01033 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
TIMP1P01033 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC16.26■□□□□ 0.19
TIMP1P01033 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TIMP1P01033 SLC44A3-209ENST00000532427 1912 ntTSL 2 BASIC16.26■□□□□ 0.19
TIMP1P01033 Z69890.1-201ENST00000382990 339 ntBASIC16.26■□□□□ 0.19
TIMP1P01033 AL157407.1-201ENST00000435784 904 ntBASIC16.26■□□□□ 0.19
TIMP1P01033 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TIMP1P01033 PPOX-204ENST00000462866 473 ntTSL 5 BASIC16.26■□□□□ 0.19
TIMP1P01033 AC091179.2-201ENST00000495536 532 ntTSL 3 BASIC16.26■□□□□ 0.19
TIMP1P01033 VDAC3-211ENST00000522572 799 ntTSL 5 BASIC16.26■□□□□ 0.19
TIMP1P01033 AP003398.1-201ENST00000531124 318 ntBASIC16.26■□□□□ 0.19
TIMP1P01033 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
TIMP1P01033 AC093752.3-201ENST00000567343 901 ntBASIC16.26■□□□□ 0.19
TIMP1P01033 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC16.26■□□□□ 0.19
TIMP1P01033 IRF3-225ENST00000600022 882 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TIMP1P01033 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC16.26■□□□□ 0.19
TIMP1P01033 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TIMP1P01033 AC027601.3-201ENST00000622907 509 ntBASIC16.26■□□□□ 0.19
TIMP1P01033 AC092299.1-201ENST00000632679 757 ntBASIC16.26■□□□□ 0.19
TIMP1P01033 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
TIMP1P01033 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC16.26■□□□□ 0.19
TIMP1P01033 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
TIMP1P01033 AC144522.1-201ENST00000625111 1658 ntBASIC16.26■□□□□ 0.19
TIMP1P01033 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TIMP1P01033 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC16.26■□□□□ 0.19
TIMP1P01033 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms