Protein–RNA interactions for Protein: O75346

ZNF253, Zinc finger protein 253, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253O75346 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
ZNF253O75346 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
ZNF253O75346 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC12.05□□□□□ -0.48
ZNF253O75346 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
ZNF253O75346 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
ZNF253O75346 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
ZNF253O75346 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
ZNF253O75346 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
ZNF253O75346 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
ZNF253O75346 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC12.05□□□□□ -0.48
ZNF253O75346 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
ZNF253O75346 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
ZNF253O75346 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
ZNF253O75346 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
ZNF253O75346 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
ZNF253O75346 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC12.04□□□□□ -0.48
ZNF253O75346 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
ZNF253O75346 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC12.04□□□□□ -0.48
ZNF253O75346 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
ZNF253O75346 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
ZNF253O75346 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC12.04□□□□□ -0.48
ZNF253O75346 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC12.04□□□□□ -0.48
ZNF253O75346 PI4KA-201ENST00000255882 6752 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
ZNF253O75346 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
ZNF253O75346 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC12.04□□□□□ -0.48
ZNF253O75346 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
ZNF253O75346 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
ZNF253O75346 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
ZNF253O75346 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
ZNF253O75346 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC12.04□□□□□ -0.48
ZNF253O75346 MRPL3P1-201ENST00000400109 1033 ntBASIC12.04□□□□□ -0.48
ZNF253O75346 RPL5P21-201ENST00000404620 815 ntBASIC12.04□□□□□ -0.48
ZNF253O75346 AC142381.1-201ENST00000426099 345 ntBASIC12.04□□□□□ -0.48
ZNF253O75346 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC12.04□□□□□ -0.48
ZNF253O75346 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC12.04□□□□□ -0.48
ZNF253O75346 PHKG1P2-201ENST00000457537 863 ntBASIC12.04□□□□□ -0.48
ZNF253O75346 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC12.04□□□□□ -0.48
ZNF253O75346 AC018845.2-201ENST00000568326 409 ntBASIC12.04□□□□□ -0.48
ZNF253O75346 SLC25A6P4-201ENST00000586535 553 ntBASIC12.04□□□□□ -0.48
ZNF253O75346 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC12.04□□□□□ -0.48
ZNF253O75346 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC12.04□□□□□ -0.48
ZNF253O75346 IRF5-214ENST00000613821 595 ntTSL 5 BASIC12.04□□□□□ -0.48
ZNF253O75346 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC12.04□□□□□ -0.48
ZNF253O75346 FOXO1B-201ENST00000504678 1527 ntBASIC12.04□□□□□ -0.48
ZNF253O75346 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
ZNF253O75346 WASHC2C-210ENST00000623400 4616 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
ZNF253O75346 TMEM245-201ENST00000374586 7980 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
ZNF253O75346 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
ZNF253O75346 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
ZNF253O75346 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC12.04□□□□□ -0.48
ZNF253O75346 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
ZNF253O75346 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
ZNF253O75346 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
ZNF253O75346 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC12.04□□□□□ -0.48
ZNF253O75346 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
ZNF253O75346 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
ZNF253O75346 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
ZNF253O75346 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
ZNF253O75346 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
ZNF253O75346 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
ZNF253O75346 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
ZNF253O75346 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
ZNF253O75346 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
ZNF253O75346 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
ZNF253O75346 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC12.04□□□□□ -0.48
ZNF253O75346 INTS4P1-203ENST00000641008 3683 ntBASIC12.04□□□□□ -0.48
ZNF253O75346 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
ZNF253O75346 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
ZNF253O75346 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
ZNF253O75346 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC12.03□□□□□ -0.48
ZNF253O75346 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
ZNF253O75346 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
ZNF253O75346 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC12.03□□□□□ -0.48
ZNF253O75346 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
ZNF253O75346 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
ZNF253O75346 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC12.03□□□□□ -0.48
ZNF253O75346 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
ZNF253O75346 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
ZNF253O75346 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC12.03□□□□□ -0.48
ZNF253O75346 ZEB1-AS1-208ENST00000607166 2503 ntBASIC12.03□□□□□ -0.48
ZNF253O75346 LARP4-201ENST00000293618 6296 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
ZNF253O75346 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC12.03□□□□□ -0.48
ZNF253O75346 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
ZNF253O75346 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC12.03□□□□□ -0.48
ZNF253O75346 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
ZNF253O75346 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC12.03□□□□□ -0.48
ZNF253O75346 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
ZNF253O75346 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
ZNF253O75346 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
ZNF253O75346 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
ZNF253O75346 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
ZNF253O75346 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
ZNF253O75346 HLA-H-201ENST00000383620 1096 ntBASIC12.03□□□□□ -0.48
ZNF253O75346 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
ZNF253O75346 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC12.03□□□□□ -0.48
ZNF253O75346 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC12.03□□□□□ -0.48
ZNF253O75346 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC12.03□□□□□ -0.48
ZNF253O75346 RNA5SP410-201ENST00000516285 106 ntBASIC12.03□□□□□ -0.48
ZNF253O75346 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC12.03□□□□□ -0.48
ZNF253O75346 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC12.03□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms