Protein–RNA interactions for Protein: O75340

PDCD6, Programmed cell death protein 6, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6O75340 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
PDCD6O75340 MPI-203ENST00000535694 1523 ntTSL 2 BASIC12.99□□□□□ -0.33
PDCD6O75340 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
PDCD6O75340 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
PDCD6O75340 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
PDCD6O75340 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
PDCD6O75340 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
PDCD6O75340 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
PDCD6O75340 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
PDCD6O75340 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
PDCD6O75340 GOLGA6L17P-202ENST00000614358 1398 ntBASIC12.99□□□□□ -0.33
PDCD6O75340 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
PDCD6O75340 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC12.99□□□□□ -0.33
PDCD6O75340 RPL37AP1-201ENST00000412502 279 ntBASIC12.99□□□□□ -0.33
PDCD6O75340 TOMM22P5-201ENST00000416399 439 ntBASIC12.99□□□□□ -0.33
PDCD6O75340 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC12.99□□□□□ -0.33
PDCD6O75340 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC12.99□□□□□ -0.33
PDCD6O75340 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
PDCD6O75340 HLA-V-204ENST00000476601 1289 ntBASIC12.99□□□□□ -0.33
PDCD6O75340 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC12.99□□□□□ -0.33
PDCD6O75340 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
PDCD6O75340 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
PDCD6O75340 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
PDCD6O75340 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
PDCD6O75340 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC12.99□□□□□ -0.33
PDCD6O75340 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
PDCD6O75340 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
PDCD6O75340 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
PDCD6O75340 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC12.99□□□□□ -0.33
PDCD6O75340 GRK6P1-201ENST00000400595 1711 ntBASIC12.99□□□□□ -0.33
PDCD6O75340 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
PDCD6O75340 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
PDCD6O75340 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC12.99□□□□□ -0.33
PDCD6O75340 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
PDCD6O75340 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
PDCD6O75340 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
PDCD6O75340 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
PDCD6O75340 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
PDCD6O75340 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
PDCD6O75340 AC007787.1-201ENST00000588095 1583 ntBASIC12.98□□□□□ -0.33
PDCD6O75340 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC12.98□□□□□ -0.33
PDCD6O75340 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
PDCD6O75340 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC12.98□□□□□ -0.33
PDCD6O75340 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
PDCD6O75340 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC12.98□□□□□ -0.33
PDCD6O75340 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC12.98□□□□□ -0.33
PDCD6O75340 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
PDCD6O75340 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
PDCD6O75340 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC12.98□□□□□ -0.33
PDCD6O75340 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
PDCD6O75340 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC12.98□□□□□ -0.33
PDCD6O75340 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
PDCD6O75340 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
PDCD6O75340 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
PDCD6O75340 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
PDCD6O75340 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC12.98□□□□□ -0.33
PDCD6O75340 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
PDCD6O75340 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
PDCD6O75340 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC12.98□□□□□ -0.33
PDCD6O75340 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
PDCD6O75340 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
PDCD6O75340 AC211486.1-202ENST00000416371 468 ntBASIC12.98□□□□□ -0.33
PDCD6O75340 BX842568.4-201ENST00000421222 227 ntBASIC12.98□□□□□ -0.33
PDCD6O75340 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
PDCD6O75340 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC12.98□□□□□ -0.33
PDCD6O75340 RN7SL618P-201ENST00000477850 296 ntBASIC12.98□□□□□ -0.33
PDCD6O75340 AC112482.1-201ENST00000492080 688 ntBASIC12.98□□□□□ -0.33
PDCD6O75340 AC211476.1-201ENST00000503899 468 ntBASIC12.98□□□□□ -0.33
PDCD6O75340 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC12.98□□□□□ -0.33
PDCD6O75340 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC12.98□□□□□ -0.33
PDCD6O75340 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
PDCD6O75340 LINC01115-203ENST00000606068 577 ntBASIC12.98□□□□□ -0.33
PDCD6O75340 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC12.98□□□□□ -0.33
PDCD6O75340 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC12.98□□□□□ -0.33
PDCD6O75340 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
PDCD6O75340 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
PDCD6O75340 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
PDCD6O75340 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC12.98□□□□□ -0.33
PDCD6O75340 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
PDCD6O75340 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
PDCD6O75340 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
PDCD6O75340 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
PDCD6O75340 TP73-209ENST00000603362 1668 ntTSL 5 BASIC12.98□□□□□ -0.33
PDCD6O75340 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC12.98□□□□□ -0.33
PDCD6O75340 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
PDCD6O75340 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
PDCD6O75340 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
PDCD6O75340 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC12.98□□□□□ -0.33
PDCD6O75340 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC12.98□□□□□ -0.33
PDCD6O75340 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
PDCD6O75340 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
PDCD6O75340 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC12.98□□□□□ -0.33
PDCD6O75340 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
PDCD6O75340 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
PDCD6O75340 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC12.98□□□□□ -0.33
PDCD6O75340 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
PDCD6O75340 AC138969.3-201ENST00000546612 1459 ntBASIC12.97□□□□□ -0.33
PDCD6O75340 AC138932.2-201ENST00000548268 1459 ntBASIC12.97□□□□□ -0.33
PDCD6O75340 AC126755.4-201ENST00000549796 1459 ntBASIC12.97□□□□□ -0.33
PDCD6O75340 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC12.97□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms