Protein–RNA interactions for Protein: O15260

SURF4, Surfeit locus protein 4, humanhuman

Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SURF4O15260 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC13.9□□□□□ -0.18
SURF4O15260 AC007967.4-201ENST00000614700 386 ntBASIC13.9□□□□□ -0.18
SURF4O15260 AL035456.1-201ENST00000456064 1369 ntBASIC13.9□□□□□ -0.18
SURF4O15260 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SURF4O15260 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC13.9□□□□□ -0.18
SURF4O15260 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SURF4O15260 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
SURF4O15260 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
SURF4O15260 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC13.9□□□□□ -0.18
SURF4O15260 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SURF4O15260 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC13.9□□□□□ -0.18
SURF4O15260 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC13.9□□□□□ -0.18
SURF4O15260 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
SURF4O15260 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SURF4O15260 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC13.9□□□□□ -0.18
SURF4O15260 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
SURF4O15260 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SURF4O15260 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SURF4O15260 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC13.9□□□□□ -0.18
SURF4O15260 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
SURF4O15260 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC13.9□□□□□ -0.18
SURF4O15260 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
SURF4O15260 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SURF4O15260 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SURF4O15260 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SURF4O15260 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC13.9□□□□□ -0.19
SURF4O15260 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC13.9□□□□□ -0.19
SURF4O15260 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.19
SURF4O15260 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SURF4O15260 AC097376.2-205ENST00000610159 5334 ntBASIC13.89□□□□□ -0.19
SURF4O15260 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
SURF4O15260 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
SURF4O15260 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SURF4O15260 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
SURF4O15260 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SURF4O15260 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SURF4O15260 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SURF4O15260 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
SURF4O15260 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
SURF4O15260 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC13.89□□□□□ -0.19
SURF4O15260 ZBTB45P1-201ENST00000452761 1456 ntBASIC13.89□□□□□ -0.19
SURF4O15260 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC13.89□□□□□ -0.19
SURF4O15260 GOLGA6L17P-202ENST00000614358 1398 ntBASIC13.89□□□□□ -0.19
SURF4O15260 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
SURF4O15260 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SURF4O15260 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
SURF4O15260 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SURF4O15260 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
SURF4O15260 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SURF4O15260 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SURF4O15260 R3HDM2P2-201ENST00000401880 2116 ntBASIC13.89□□□□□ -0.19
SURF4O15260 SPDYE7P-202ENST00000420373 878 ntBASIC13.89□□□□□ -0.19
SURF4O15260 TSEN15P1-201ENST00000423257 515 ntBASIC13.89□□□□□ -0.19
SURF4O15260 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
SURF4O15260 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC13.89□□□□□ -0.19
SURF4O15260 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC13.89□□□□□ -0.19
SURF4O15260 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC13.89□□□□□ -0.19
SURF4O15260 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SURF4O15260 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
SURF4O15260 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC13.89□□□□□ -0.19
SURF4O15260 DAD1-205ENST00000543337 501 ntTSL 3 BASIC13.89□□□□□ -0.19
SURF4O15260 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC13.89□□□□□ -0.19
SURF4O15260 AC004449.1-201ENST00000564240 433 ntBASIC13.89□□□□□ -0.19
SURF4O15260 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SURF4O15260 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC13.89□□□□□ -0.19
SURF4O15260 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC13.89□□□□□ -0.19
SURF4O15260 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC13.89□□□□□ -0.19
SURF4O15260 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC13.89□□□□□ -0.19
SURF4O15260 AC025181.2-201ENST00000606994 802 ntBASIC13.89□□□□□ -0.19
SURF4O15260 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC13.89□□□□□ -0.19
SURF4O15260 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
SURF4O15260 HSPA7-201ENST00000445535 1927 ntBASIC13.89□□□□□ -0.19
SURF4O15260 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
SURF4O15260 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
SURF4O15260 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SURF4O15260 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
SURF4O15260 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
SURF4O15260 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
SURF4O15260 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
SURF4O15260 Z97205.2-201ENST00000564697 1639 ntBASIC13.89□□□□□ -0.19
SURF4O15260 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SURF4O15260 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SURF4O15260 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC13.89□□□□□ -0.19
SURF4O15260 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SURF4O15260 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SURF4O15260 OR2I1P-209ENST00000641730 5365 ntBASIC13.89□□□□□ -0.19
SURF4O15260 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
SURF4O15260 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SURF4O15260 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SURF4O15260 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SURF4O15260 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SURF4O15260 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC13.88□□□□□ -0.19
SURF4O15260 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SURF4O15260 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
SURF4O15260 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SURF4O15260 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC13.88□□□□□ -0.19
SURF4O15260 AC027601.5-201ENST00000624065 2482 ntBASIC13.88□□□□□ -0.19
SURF4O15260 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SURF4O15260 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC13.88□□□□□ -0.19
SURF4O15260 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms