Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC20.62■□□□□ 0.89
CHD2O14647 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC20.62■□□□□ 0.89
CHD2O14647 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CHD2O14647 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CHD2O14647 AP001029.1-201ENST00000589843 168 ntTSL 3 BASIC20.62■□□□□ 0.89
CHD2O14647 ZNF530-203ENST00000597864 634 ntTSL 2 BASIC20.62■□□□□ 0.89
CHD2O14647 AC005759.1-202ENST00000599416 415 ntTSL 3 BASIC20.62■□□□□ 0.89
CHD2O14647 AC011471.3-201ENST00000623576 402 ntBASIC20.62■□□□□ 0.89
CHD2O14647 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC20.62■□□□□ 0.89
CHD2O14647 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC20.62■□□□□ 0.89
CHD2O14647 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CHD2O14647 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CHD2O14647 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CHD2O14647 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CHD2O14647 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC20.62■□□□□ 0.89
CHD2O14647 TNFSF11-201ENST00000239849 911 ntTSL 5 BASIC20.62■□□□□ 0.89
CHD2O14647 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CHD2O14647 AQP7P5-201ENST00000428759 1049 ntBASIC20.62■□□□□ 0.89
CHD2O14647 ASGR2-203ENST00000446679 879 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CHD2O14647 AQP7P4-201ENST00000447083 1042 ntBASIC20.62■□□□□ 0.89
CHD2O14647 AQP7P2-201ENST00000453967 1041 ntBASIC20.62■□□□□ 0.89
CHD2O14647 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
CHD2O14647 RPS5-204ENST00000598098 536 ntTSL 2 BASIC20.62■□□□□ 0.89
CHD2O14647 AP000322.3-201ENST00000608665 388 ntBASIC20.62■□□□□ 0.89
CHD2O14647 AQP7P3-201ENST00000624547 1041 ntBASIC20.62■□□□□ 0.89
CHD2O14647 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC20.62■□□□□ 0.89
CHD2O14647 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CHD2O14647 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CHD2O14647 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CHD2O14647 KRT8P28-201ENST00000433288 1390 ntBASIC20.61■□□□□ 0.89
CHD2O14647 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC20.61■□□□□ 0.89
CHD2O14647 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CHD2O14647 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CHD2O14647 ING4-207ENST00000446105 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CHD2O14647 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
CHD2O14647 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
CHD2O14647 LY86-202ENST00000379953 1197 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
CHD2O14647 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC20.61■□□□□ 0.89
CHD2O14647 LINC00866-201ENST00000427379 418 ntTSL 2 BASIC20.61■□□□□ 0.89
CHD2O14647 TREX1-206ENST00000629913 945 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
CHD2O14647 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CHD2O14647 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
CHD2O14647 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC20.61■□□□□ 0.89
CHD2O14647 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CHD2O14647 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC20.61■□□□□ 0.89
CHD2O14647 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC20.61■□□□□ 0.89
CHD2O14647 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CHD2O14647 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC20.6■□□□□ 0.89
CHD2O14647 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CHD2O14647 PTTG1IP-202ENST00000397886 755 ntTSL 4 BASIC20.6■□□□□ 0.89
CHD2O14647 AL137058.1-201ENST00000418237 673 ntTSL 5 BASIC20.6■□□□□ 0.89
CHD2O14647 ERP29P1-201ENST00000442902 706 ntBASIC20.6■□□□□ 0.89
CHD2O14647 DDX39AP1-201ENST00000445147 1181 ntBASIC20.6■□□□□ 0.89
CHD2O14647 AC244197.1-201ENST00000456494 951 ntBASIC20.6■□□□□ 0.89
CHD2O14647 PRRC2B-207ENST00000458550 899 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CHD2O14647 LINC02228-201ENST00000507600 534 ntTSL 2 BASIC20.6■□□□□ 0.89
CHD2O14647 AC105390.1-201ENST00000511330 560 ntTSL 4 BASIC20.6■□□□□ 0.89
CHD2O14647 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC20.6■□□□□ 0.89
CHD2O14647 AP003390.1-201ENST00000533253 523 ntTSL 5 BASIC20.6■□□□□ 0.89
CHD2O14647 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC20.6■□□□□ 0.89
CHD2O14647 AC020659.1-202ENST00000564432 531 ntTSL 5 BASIC20.6■□□□□ 0.89
CHD2O14647 AL606763.1-201ENST00000629535 462 ntTSL 3 BASIC20.6■□□□□ 0.89
CHD2O14647 AC114296.1-204ENST00000637197 1173 ntAPPRIS P5 TSL 5 BASIC20.6■□□□□ 0.89
CHD2O14647 AC079325.2-201ENST00000641710 606 ntAPPRIS P5 BASIC20.6■□□□□ 0.89
CHD2O14647 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CHD2O14647 PCDHB19P-201ENST00000570871 2371 ntBASIC20.6■□□□□ 0.89
CHD2O14647 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CHD2O14647 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC20.6■□□□□ 0.89
CHD2O14647 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CHD2O14647 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CHD2O14647 RBM4B-201ENST00000310046 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CHD2O14647 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CHD2O14647 OR2V1-201ENST00000329365 948 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
CHD2O14647 JTB-202ENST00000356648 1040 ntTSL 2 BASIC20.6■□□□□ 0.89
CHD2O14647 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC20.6■□□□□ 0.89
CHD2O14647 AGPAT5P1-201ENST00000455855 1019 ntBASIC20.6■□□□□ 0.89
CHD2O14647 AL691482.3-201ENST00000504773 987 ntTSL 2 BASIC20.6■□□□□ 0.89
CHD2O14647 TUBB3-208ENST00000555576 572 ntTSL 4 BASIC20.6■□□□□ 0.89
CHD2O14647 ATP2A1-AS1-201ENST00000561547 558 ntTSL 2 BASIC20.6■□□□□ 0.89
CHD2O14647 THY1-209ENST00000580275 578 ntTSL 3 BASIC20.6■□□□□ 0.89
CHD2O14647 AC018761.2-201ENST00000585496 296 ntTSL 3 BASIC20.6■□□□□ 0.89
CHD2O14647 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC20.6■□□□□ 0.89
CHD2O14647 AC012073.1-201ENST00000606114 1108 ntBASIC20.6■□□□□ 0.89
CHD2O14647 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC20.6■□□□□ 0.89
CHD2O14647 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CHD2O14647 MINDY4B-201ENST00000465419 1383 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
CHD2O14647 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC20.59■□□□□ 0.89
CHD2O14647 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
CHD2O14647 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
CHD2O14647 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC20.59■□□□□ 0.89
CHD2O14647 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC20.59■□□□□ 0.89
CHD2O14647 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
CHD2O14647 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC20.59■□□□□ 0.89
CHD2O14647 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
CHD2O14647 C7orf61-201ENST00000332375 1004 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CHD2O14647 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CHD2O14647 HCG9-201ENST00000376800 663 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CHD2O14647 AL135901.1-201ENST00000451812 333 ntBASIC20.59■□□□□ 0.89
CHD2O14647 MDH2-205ENST00000461263 648 ntTSL 2 BASIC20.59■□□□□ 0.89
CHD2O14647 AP003068.3-201ENST00000527789 175 ntTSL 2 BASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 67.6 ms