Protein–RNA interactions for Protein: O00533

CHL1, Neural cell adhesion molecule L1-like protein, humanhuman

Predictions only

Length 1,208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1O00533 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC19.51■□□□□ 0.71
CHL1O00533 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CHL1O00533 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CHL1O00533 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC19.5■□□□□ 0.71
CHL1O00533 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC19.5■□□□□ 0.71
CHL1O00533 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CHL1O00533 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
CHL1O00533 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CHL1O00533 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CHL1O00533 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CHL1O00533 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
CHL1O00533 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CHL1O00533 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC19.5■□□□□ 0.71
CHL1O00533 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC19.5■□□□□ 0.71
CHL1O00533 RN7SKP175-201ENST00000408472 289 ntBASIC19.5■□□□□ 0.71
CHL1O00533 AC004945.1-201ENST00000416738 983 ntBASIC19.5■□□□□ 0.71
CHL1O00533 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC19.5■□□□□ 0.71
CHL1O00533 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CHL1O00533 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC19.5■□□□□ 0.71
CHL1O00533 HOMER2P2-201ENST00000451621 847 ntBASIC19.5■□□□□ 0.71
CHL1O00533 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC19.5■□□□□ 0.71
CHL1O00533 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC19.5■□□□□ 0.71
CHL1O00533 AC092658.1-201ENST00000505836 891 ntBASIC19.5■□□□□ 0.71
CHL1O00533 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CHL1O00533 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC19.5■□□□□ 0.71
CHL1O00533 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC19.5■□□□□ 0.71
CHL1O00533 AP006547.1-201ENST00000563435 692 ntBASIC19.5■□□□□ 0.71
CHL1O00533 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC19.5■□□□□ 0.71
CHL1O00533 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CHL1O00533 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC19.5■□□□□ 0.71
CHL1O00533 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CHL1O00533 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CHL1O00533 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC19.5■□□□□ 0.71
CHL1O00533 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CHL1O00533 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CHL1O00533 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CHL1O00533 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
CHL1O00533 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CHL1O00533 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CHL1O00533 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC19.49■□□□□ 0.71
CHL1O00533 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
CHL1O00533 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CHL1O00533 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CHL1O00533 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CHL1O00533 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC19.49■□□□□ 0.71
CHL1O00533 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CHL1O00533 AC003102.2-201ENST00000589195 1469 ntBASIC19.49■□□□□ 0.71
CHL1O00533 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CHL1O00533 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
CHL1O00533 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CHL1O00533 AL023775.1-201ENST00000454907 1746 ntBASIC19.49■□□□□ 0.71
CHL1O00533 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
CHL1O00533 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC19.49■□□□□ 0.71
CHL1O00533 MECR-202ENST00000373791 2416 ntTSL 2 BASIC19.49■□□□□ 0.71
CHL1O00533 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CHL1O00533 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CHL1O00533 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC19.49■□□□□ 0.71
CHL1O00533 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC19.49■□□□□ 0.71
CHL1O00533 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC19.49■□□□□ 0.71
CHL1O00533 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CHL1O00533 CYGB-203ENST00000589145 788 ntTSL 3 BASIC19.49■□□□□ 0.71
CHL1O00533 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC19.49■□□□□ 0.71
CHL1O00533 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
CHL1O00533 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CHL1O00533 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CHL1O00533 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CHL1O00533 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC19.49■□□□□ 0.71
CHL1O00533 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CHL1O00533 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CHL1O00533 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CHL1O00533 AC011840.2-201ENST00000563063 1520 ntBASIC19.49■□□□□ 0.71
CHL1O00533 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC19.49■□□□□ 0.71
CHL1O00533 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CHL1O00533 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC19.49■□□□□ 0.71
CHL1O00533 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
CHL1O00533 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CHL1O00533 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CHL1O00533 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CHL1O00533 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CHL1O00533 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC19.49■□□□□ 0.71
CHL1O00533 LINC00528-201ENST00000600723 2160 ntBASIC19.49■□□□□ 0.71
CHL1O00533 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC19.49■□□□□ 0.71
CHL1O00533 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CHL1O00533 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CHL1O00533 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CHL1O00533 AC009093.2-202ENST00000620513 2079 ntBASIC19.48■□□□□ 0.71
CHL1O00533 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC19.48■□□□□ 0.71
CHL1O00533 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC19.48■□□□□ 0.71
CHL1O00533 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
CHL1O00533 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CHL1O00533 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CHL1O00533 AC020910.5-201ENST00000623668 1865 ntBASIC19.48■□□□□ 0.71
CHL1O00533 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CHL1O00533 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CHL1O00533 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CHL1O00533 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CHL1O00533 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CHL1O00533 FAM86MP-201ENST00000340703 885 ntBASIC19.48■□□□□ 0.71
CHL1O00533 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CHL1O00533 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 57.6 ms