Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 AP002414.3-201ENST00000589352 1468 ntBASIC10.8□□□□□ -0.68
LINC01546A6NGU7 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC10.8□□□□□ -0.68
LINC01546A6NGU7 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
LINC01546A6NGU7 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
LINC01546A6NGU7 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC10.8□□□□□ -0.68
LINC01546A6NGU7 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
LINC01546A6NGU7 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
LINC01546A6NGU7 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
LINC01546A6NGU7 CICP16-201ENST00000502609 2813 ntBASIC10.8□□□□□ -0.68
LINC01546A6NGU7 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
LINC01546A6NGU7 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC10.8□□□□□ -0.68
LINC01546A6NGU7 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
LINC01546A6NGU7 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
LINC01546A6NGU7 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC10.79□□□□□ -0.68
LINC01546A6NGU7 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
LINC01546A6NGU7 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC10.79□□□□□ -0.68
LINC01546A6NGU7 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
LINC01546A6NGU7 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC10.79□□□□□ -0.68
LINC01546A6NGU7 DPP8-202ENST00000321147 3125 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
LINC01546A6NGU7 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC10.79□□□□□ -0.68
LINC01546A6NGU7 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC10.79□□□□□ -0.68
LINC01546A6NGU7 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
LINC01546A6NGU7 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
LINC01546A6NGU7 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
LINC01546A6NGU7 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
LINC01546A6NGU7 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
LINC01546A6NGU7 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
LINC01546A6NGU7 SLC4A1APP2-201ENST00000424054 1259 ntBASIC10.79□□□□□ -0.68
LINC01546A6NGU7 ISCU-203ENST00000431221 799 ntTSL 2 BASIC10.79□□□□□ -0.68
LINC01546A6NGU7 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
LINC01546A6NGU7 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC10.79□□□□□ -0.68
LINC01546A6NGU7 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
LINC01546A6NGU7 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC10.79□□□□□ -0.68
LINC01546A6NGU7 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC10.79□□□□□ -0.68
LINC01546A6NGU7 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
LINC01546A6NGU7 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC10.79□□□□□ -0.68
LINC01546A6NGU7 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC10.79□□□□□ -0.68
LINC01546A6NGU7 NAA38-207ENST00000576861 556 ntTSL 3 BASIC10.79□□□□□ -0.68
LINC01546A6NGU7 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
LINC01546A6NGU7 AC023141.13-201ENST00000604991 943 ntBASIC10.79□□□□□ -0.68
LINC01546A6NGU7 MED16-214ENST00000617672 554 ntTSL 5 BASIC10.79□□□□□ -0.68
LINC01546A6NGU7 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
LINC01546A6NGU7 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
LINC01546A6NGU7 C2-206ENST00000442278 2434 ntTSL 2 BASIC10.79□□□□□ -0.68
LINC01546A6NGU7 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC10.79□□□□□ -0.68
LINC01546A6NGU7 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
LINC01546A6NGU7 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
LINC01546A6NGU7 TBCE-207ENST00000543662 2117 ntAPPRIS ALT2 TSL 2 BASIC10.79□□□□□ -0.68
LINC01546A6NGU7 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
LINC01546A6NGU7 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC10.79□□□□□ -0.68
LINC01546A6NGU7 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
LINC01546A6NGU7 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
LINC01546A6NGU7 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC10.79□□□□□ -0.68
LINC01546A6NGU7 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC10.79□□□□□ -0.68
LINC01546A6NGU7 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC10.79□□□□□ -0.68
LINC01546A6NGU7 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
LINC01546A6NGU7 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
LINC01546A6NGU7 AL360270.3-201ENST00000609118 1348 ntBASIC10.79□□□□□ -0.68
LINC01546A6NGU7 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
LINC01546A6NGU7 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
LINC01546A6NGU7 TMEM130-203ENST00000416379 2881 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
LINC01546A6NGU7 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
LINC01546A6NGU7 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
LINC01546A6NGU7 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
LINC01546A6NGU7 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC10.79□□□□□ -0.68
LINC01546A6NGU7 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC10.79□□□□□ -0.68
LINC01546A6NGU7 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC10.79□□□□□ -0.68
LINC01546A6NGU7 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
LINC01546A6NGU7 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
LINC01546A6NGU7 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
LINC01546A6NGU7 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
LINC01546A6NGU7 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC10.78□□□□□ -0.68
LINC01546A6NGU7 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
LINC01546A6NGU7 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
LINC01546A6NGU7 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
LINC01546A6NGU7 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC10.78□□□□□ -0.68
LINC01546A6NGU7 TNN-203ENST00000622870 3719 ntTSL 5 BASIC10.78□□□□□ -0.68
LINC01546A6NGU7 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
LINC01546A6NGU7 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
LINC01546A6NGU7 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC10.78□□□□□ -0.68
LINC01546A6NGU7 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC10.78□□□□□ -0.68
LINC01546A6NGU7 SPATA7-217ENST00000556553 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
LINC01546A6NGU7 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
LINC01546A6NGU7 RDX-218ENST00000544551 4117 ntTSL 2 BASIC10.78□□□□□ -0.68
LINC01546A6NGU7 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC10.78□□□□□ -0.68
LINC01546A6NGU7 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
LINC01546A6NGU7 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
LINC01546A6NGU7 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
LINC01546A6NGU7 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
LINC01546A6NGU7 CBR1-202ENST00000399191 838 ntTSL 3 BASIC10.78□□□□□ -0.68
LINC01546A6NGU7 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC10.78□□□□□ -0.68
LINC01546A6NGU7 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC10.78□□□□□ -0.68
LINC01546A6NGU7 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC10.78□□□□□ -0.68
LINC01546A6NGU7 HCG4B-203ENST00000450128 991 ntBASIC10.78□□□□□ -0.68
LINC01546A6NGU7 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC10.78□□□□□ -0.68
LINC01546A6NGU7 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC10.78□□□□□ -0.68
LINC01546A6NGU7 SAPCD2P3-201ENST00000455031 850 ntBASIC10.78□□□□□ -0.68
LINC01546A6NGU7 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC10.78□□□□□ -0.68
LINC01546A6NGU7 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC10.78□□□□□ -0.68
LINC01546A6NGU7 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC10.78□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms