Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
COL4A3BPQ9Y5P4 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
COL4A3BPQ9Y5P4 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
COL4A3BPQ9Y5P4 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
COL4A3BPQ9Y5P4 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
COL4A3BPQ9Y5P4 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
COL4A3BPQ9Y5P4 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
COL4A3BPQ9Y5P4 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
COL4A3BPQ9Y5P4 ATP5G2P4-201ENST00000442175 420 ntBASIC17.16■□□□□ 0.34
COL4A3BPQ9Y5P4 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
COL4A3BPQ9Y5P4 ACA64.2-201ENST00000459014 129 ntBASIC17.16■□□□□ 0.34
COL4A3BPQ9Y5P4 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
COL4A3BPQ9Y5P4 IGHV3-71-201ENST00000523324 359 ntBASIC17.16■□□□□ 0.34
COL4A3BPQ9Y5P4 TDH-203ENST00000531764 1110 ntBASIC17.16■□□□□ 0.34
COL4A3BPQ9Y5P4 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC17.16■□□□□ 0.34
COL4A3BPQ9Y5P4 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
COL4A3BPQ9Y5P4 RAB43P1-201ENST00000561790 589 ntBASIC17.16■□□□□ 0.34
COL4A3BPQ9Y5P4 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC17.16■□□□□ 0.34
COL4A3BPQ9Y5P4 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC17.16■□□□□ 0.34
COL4A3BPQ9Y5P4 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
COL4A3BPQ9Y5P4 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
COL4A3BPQ9Y5P4 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
COL4A3BPQ9Y5P4 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC17.16■□□□□ 0.34
COL4A3BPQ9Y5P4 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
COL4A3BPQ9Y5P4 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
COL4A3BPQ9Y5P4 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
COL4A3BPQ9Y5P4 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
COL4A3BPQ9Y5P4 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
COL4A3BPQ9Y5P4 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
COL4A3BPQ9Y5P4 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
COL4A3BPQ9Y5P4 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC17.16■□□□□ 0.34
COL4A3BPQ9Y5P4 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
COL4A3BPQ9Y5P4 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC17.16■□□□□ 0.34
COL4A3BPQ9Y5P4 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC17.16■□□□□ 0.34
COL4A3BPQ9Y5P4 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
COL4A3BPQ9Y5P4 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
COL4A3BPQ9Y5P4 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
COL4A3BPQ9Y5P4 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
COL4A3BPQ9Y5P4 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
COL4A3BPQ9Y5P4 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC17.15■□□□□ 0.34
COL4A3BPQ9Y5P4 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC17.15■□□□□ 0.34
COL4A3BPQ9Y5P4 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
COL4A3BPQ9Y5P4 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
COL4A3BPQ9Y5P4 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
COL4A3BPQ9Y5P4 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
COL4A3BPQ9Y5P4 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC17.15■□□□□ 0.34
COL4A3BPQ9Y5P4 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
COL4A3BPQ9Y5P4 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
COL4A3BPQ9Y5P4 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC17.15■□□□□ 0.34
COL4A3BPQ9Y5P4 GHSR-202ENST00000427970 912 ntBASIC17.15■□□□□ 0.34
COL4A3BPQ9Y5P4 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC17.15■□□□□ 0.34
COL4A3BPQ9Y5P4 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC17.15■□□□□ 0.34
COL4A3BPQ9Y5P4 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
COL4A3BPQ9Y5P4 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC17.15■□□□□ 0.34
COL4A3BPQ9Y5P4 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
COL4A3BPQ9Y5P4 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC17.15■□□□□ 0.34
COL4A3BPQ9Y5P4 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC17.15■□□□□ 0.34
COL4A3BPQ9Y5P4 CLUHP6-201ENST00000580789 941 ntBASIC17.15■□□□□ 0.34
COL4A3BPQ9Y5P4 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
COL4A3BPQ9Y5P4 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC17.15■□□□□ 0.34
COL4A3BPQ9Y5P4 AC093813.1-201ENST00000605066 256 ntBASIC17.15■□□□□ 0.34
COL4A3BPQ9Y5P4 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC17.15■□□□□ 0.34
COL4A3BPQ9Y5P4 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
COL4A3BPQ9Y5P4 AC005252.2-201ENST00000624630 1141 ntBASIC17.15■□□□□ 0.34
COL4A3BPQ9Y5P4 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC17.15■□□□□ 0.34
COL4A3BPQ9Y5P4 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
COL4A3BPQ9Y5P4 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
COL4A3BPQ9Y5P4 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
COL4A3BPQ9Y5P4 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
COL4A3BPQ9Y5P4 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
COL4A3BPQ9Y5P4 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC17.15■□□□□ 0.34
COL4A3BPQ9Y5P4 MST1L-201ENST00000442552 2185 ntBASIC17.15■□□□□ 0.34
COL4A3BPQ9Y5P4 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
COL4A3BPQ9Y5P4 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
COL4A3BPQ9Y5P4 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
COL4A3BPQ9Y5P4 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
COL4A3BPQ9Y5P4 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
COL4A3BPQ9Y5P4 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.34
COL4A3BPQ9Y5P4 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.34
COL4A3BPQ9Y5P4 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
COL4A3BPQ9Y5P4 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC17.14■□□□□ 0.33
COL4A3BPQ9Y5P4 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
COL4A3BPQ9Y5P4 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
COL4A3BPQ9Y5P4 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
COL4A3BPQ9Y5P4 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC17.14■□□□□ 0.33
COL4A3BPQ9Y5P4 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
COL4A3BPQ9Y5P4 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
COL4A3BPQ9Y5P4 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
COL4A3BPQ9Y5P4 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
COL4A3BPQ9Y5P4 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.33
COL4A3BPQ9Y5P4 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
COL4A3BPQ9Y5P4 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
COL4A3BPQ9Y5P4 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
COL4A3BPQ9Y5P4 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
COL4A3BPQ9Y5P4 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC17.14■□□□□ 0.33
COL4A3BPQ9Y5P4 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC17.14■□□□□ 0.33
COL4A3BPQ9Y5P4 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC17.14■□□□□ 0.33
COL4A3BPQ9Y5P4 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
COL4A3BPQ9Y5P4 GAPDHP40-201ENST00000505218 1006 ntBASIC17.14■□□□□ 0.33
COL4A3BPQ9Y5P4 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms