Protein–RNA interactions for Protein: Q9Y5F0

PCDHB13, Protocadherin beta-13, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13Q9Y5F0 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHB13Q9Y5F0 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC17.11■□□□□ 0.33
PCDHB13Q9Y5F0 DFFBP1-201ENST00000433250 979 ntBASIC17.11■□□□□ 0.33
PCDHB13Q9Y5F0 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHB13Q9Y5F0 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
PCDHB13Q9Y5F0 PFN2-205ENST00000461868 613 ntTSL 2 BASIC17.11■□□□□ 0.33
PCDHB13Q9Y5F0 KDELR2-206ENST00000490996 655 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHB13Q9Y5F0 AC093534.1-201ENST00000504977 132 ntBASIC17.11■□□□□ 0.33
PCDHB13Q9Y5F0 SPINK1-203ENST00000510027 1188 ntTSL 3 BASIC17.11■□□□□ 0.33
PCDHB13Q9Y5F0 SDHD-204ENST00000528021 1071 ntTSL 3 BASIC17.11■□□□□ 0.33
PCDHB13Q9Y5F0 AC055876.2-201ENST00000531834 546 ntBASIC17.11■□□□□ 0.33
PCDHB13Q9Y5F0 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC17.11■□□□□ 0.33
PCDHB13Q9Y5F0 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC17.11■□□□□ 0.33
PCDHB13Q9Y5F0 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
PCDHB13Q9Y5F0 MIR4745-201ENST00000577608 62 ntBASIC17.11■□□□□ 0.33
PCDHB13Q9Y5F0 GPX4-206ENST00000588919 803 ntTSL 2 BASIC17.11■□□□□ 0.33
PCDHB13Q9Y5F0 AC034229.4-201ENST00000607861 441 ntBASIC17.11■□□□□ 0.33
PCDHB13Q9Y5F0 AC099568.2-201ENST00000609194 695 ntBASIC17.11■□□□□ 0.33
PCDHB13Q9Y5F0 AC016597.2-201ENST00000613256 341 ntBASIC17.11■□□□□ 0.33
PCDHB13Q9Y5F0 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC17.11■□□□□ 0.33
PCDHB13Q9Y5F0 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC17.11■□□□□ 0.33
PCDHB13Q9Y5F0 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC17.11■□□□□ 0.33
PCDHB13Q9Y5F0 AC097655.1-201ENST00000635075 318 ntBASIC17.11■□□□□ 0.33
PCDHB13Q9Y5F0 AL645728.2-202ENST00000641679 227 ntBASIC17.11■□□□□ 0.33
PCDHB13Q9Y5F0 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC17.11■□□□□ 0.33
PCDHB13Q9Y5F0 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC17.11■□□□□ 0.33
PCDHB13Q9Y5F0 SLC7A15P-201ENST00000424028 1363 ntBASIC17.11■□□□□ 0.33
PCDHB13Q9Y5F0 AL391825.1-201ENST00000457671 1364 ntBASIC17.11■□□□□ 0.33
PCDHB13Q9Y5F0 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHB13Q9Y5F0 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
PCDHB13Q9Y5F0 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC17.11■□□□□ 0.33
PCDHB13Q9Y5F0 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHB13Q9Y5F0 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHB13Q9Y5F0 AL596257.1-201ENST00000641463 2694 ntBASIC17.11■□□□□ 0.33
PCDHB13Q9Y5F0 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHB13Q9Y5F0 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHB13Q9Y5F0 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
PCDHB13Q9Y5F0 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHB13Q9Y5F0 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHB13Q9Y5F0 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHB13Q9Y5F0 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
PCDHB13Q9Y5F0 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC17.11■□□□□ 0.33
PCDHB13Q9Y5F0 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHB13Q9Y5F0 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHB13Q9Y5F0 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
PCDHB13Q9Y5F0 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHB13Q9Y5F0 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
PCDHB13Q9Y5F0 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHB13Q9Y5F0 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHB13Q9Y5F0 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHB13Q9Y5F0 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHB13Q9Y5F0 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHB13Q9Y5F0 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHB13Q9Y5F0 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHB13Q9Y5F0 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
PCDHB13Q9Y5F0 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHB13Q9Y5F0 TPRG1-AS2-201ENST00000425454 479 ntTSL 5 BASIC17.1■□□□□ 0.33
PCDHB13Q9Y5F0 AC002472.2-201ENST00000442739 958 ntBASIC17.1■□□□□ 0.33
PCDHB13Q9Y5F0 FAM86LP-201ENST00000478302 853 ntBASIC17.1■□□□□ 0.33
PCDHB13Q9Y5F0 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC17.1■□□□□ 0.33
PCDHB13Q9Y5F0 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC17.1■□□□□ 0.33
PCDHB13Q9Y5F0 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC17.1■□□□□ 0.33
PCDHB13Q9Y5F0 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC17.1■□□□□ 0.33
PCDHB13Q9Y5F0 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHB13Q9Y5F0 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
PCDHB13Q9Y5F0 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
PCDHB13Q9Y5F0 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHB13Q9Y5F0 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHB13Q9Y5F0 AC007541.1-201ENST00000570282 1469 ntBASIC17.1■□□□□ 0.33
PCDHB13Q9Y5F0 AC091951.1-201ENST00000512854 2465 ntBASIC17.1■□□□□ 0.33
PCDHB13Q9Y5F0 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHB13Q9Y5F0 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHB13Q9Y5F0 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHB13Q9Y5F0 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHB13Q9Y5F0 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC17.1■□□□□ 0.33
PCDHB13Q9Y5F0 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHB13Q9Y5F0 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHB13Q9Y5F0 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
PCDHB13Q9Y5F0 AC148477.4-201ENST00000613430 1793 ntBASIC17.1■□□□□ 0.33
PCDHB13Q9Y5F0 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHB13Q9Y5F0 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHB13Q9Y5F0 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHB13Q9Y5F0 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC17.09■□□□□ 0.33
PCDHB13Q9Y5F0 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
PCDHB13Q9Y5F0 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC17.09■□□□□ 0.33
PCDHB13Q9Y5F0 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHB13Q9Y5F0 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
PCDHB13Q9Y5F0 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC17.09■□□□□ 0.33
PCDHB13Q9Y5F0 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHB13Q9Y5F0 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHB13Q9Y5F0 MIR661-201ENST00000384842 89 ntBASIC17.09■□□□□ 0.33
PCDHB13Q9Y5F0 SUN1-204ENST00000403868 978 ntTSL 2 BASIC17.09■□□□□ 0.33
PCDHB13Q9Y5F0 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHB13Q9Y5F0 AC087499.6-201ENST00000411576 835 ntBASIC17.09■□□□□ 0.33
PCDHB13Q9Y5F0 RPS14P4-201ENST00000415880 418 ntBASIC17.09■□□□□ 0.33
PCDHB13Q9Y5F0 AL353779.1-201ENST00000434793 351 ntBASIC17.09■□□□□ 0.33
PCDHB13Q9Y5F0 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC17.09■□□□□ 0.33
PCDHB13Q9Y5F0 HMGN1P19-201ENST00000436976 333 ntBASIC17.09■□□□□ 0.33
PCDHB13Q9Y5F0 OARD1-208ENST00000469104 704 ntTSL 2 BASIC17.09■□□□□ 0.33
PCDHB13Q9Y5F0 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms