Protein–RNA interactions for Protein: Q9P0J7

KCMF1, E3 ubiquitin-protein ligase KCMF1, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCMF1Q9P0J7 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
KCMF1Q9P0J7 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
KCMF1Q9P0J7 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
KCMF1Q9P0J7 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC14.56□□□□□ -0.08
KCMF1Q9P0J7 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
KCMF1Q9P0J7 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC14.56□□□□□ -0.08
KCMF1Q9P0J7 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
KCMF1Q9P0J7 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC14.56□□□□□ -0.08
KCMF1Q9P0J7 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
KCMF1Q9P0J7 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
KCMF1Q9P0J7 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
KCMF1Q9P0J7 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
KCMF1Q9P0J7 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
KCMF1Q9P0J7 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
KCMF1Q9P0J7 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
KCMF1Q9P0J7 MPV17-208ENST00000405076 603 ntTSL 5 BASIC14.56□□□□□ -0.08
KCMF1Q9P0J7 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
KCMF1Q9P0J7 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
KCMF1Q9P0J7 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC14.56□□□□□ -0.08
KCMF1Q9P0J7 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC14.56□□□□□ -0.08
KCMF1Q9P0J7 WASH4P-201ENST00000564273 1246 ntBASIC14.56□□□□□ -0.08
KCMF1Q9P0J7 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC14.56□□□□□ -0.08
KCMF1Q9P0J7 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
KCMF1Q9P0J7 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC14.56□□□□□ -0.08
KCMF1Q9P0J7 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC14.56□□□□□ -0.08
KCMF1Q9P0J7 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC14.56□□□□□ -0.08
KCMF1Q9P0J7 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC14.56□□□□□ -0.08
KCMF1Q9P0J7 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC14.56□□□□□ -0.08
KCMF1Q9P0J7 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC14.56□□□□□ -0.08
KCMF1Q9P0J7 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
KCMF1Q9P0J7 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC14.56□□□□□ -0.08
KCMF1Q9P0J7 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
KCMF1Q9P0J7 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
KCMF1Q9P0J7 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
KCMF1Q9P0J7 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
KCMF1Q9P0J7 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
KCMF1Q9P0J7 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC14.56□□□□□ -0.08
KCMF1Q9P0J7 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
KCMF1Q9P0J7 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
KCMF1Q9P0J7 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC14.56□□□□□ -0.08
KCMF1Q9P0J7 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC14.56□□□□□ -0.08
KCMF1Q9P0J7 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
KCMF1Q9P0J7 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
KCMF1Q9P0J7 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
KCMF1Q9P0J7 ZBTB45P1-201ENST00000452761 1456 ntBASIC14.56□□□□□ -0.08
KCMF1Q9P0J7 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
KCMF1Q9P0J7 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
KCMF1Q9P0J7 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC14.56□□□□□ -0.08
KCMF1Q9P0J7 TNRC18P2-201ENST00000417666 2714 ntBASIC14.56□□□□□ -0.08
KCMF1Q9P0J7 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
KCMF1Q9P0J7 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
KCMF1Q9P0J7 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
KCMF1Q9P0J7 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
KCMF1Q9P0J7 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC14.55□□□□□ -0.08
KCMF1Q9P0J7 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC14.55□□□□□ -0.08
KCMF1Q9P0J7 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
KCMF1Q9P0J7 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
KCMF1Q9P0J7 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
KCMF1Q9P0J7 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
KCMF1Q9P0J7 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC14.55□□□□□ -0.08
KCMF1Q9P0J7 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
KCMF1Q9P0J7 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
KCMF1Q9P0J7 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC14.55□□□□□ -0.08
KCMF1Q9P0J7 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC14.55□□□□□ -0.08
KCMF1Q9P0J7 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
KCMF1Q9P0J7 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
KCMF1Q9P0J7 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
KCMF1Q9P0J7 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
KCMF1Q9P0J7 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC14.55□□□□□ -0.08
KCMF1Q9P0J7 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
KCMF1Q9P0J7 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC14.55□□□□□ -0.08
KCMF1Q9P0J7 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC14.55□□□□□ -0.08
KCMF1Q9P0J7 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC14.55□□□□□ -0.08
KCMF1Q9P0J7 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC14.55□□□□□ -0.08
KCMF1Q9P0J7 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC14.55□□□□□ -0.08
KCMF1Q9P0J7 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC14.55□□□□□ -0.08
KCMF1Q9P0J7 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC14.55□□□□□ -0.08
KCMF1Q9P0J7 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC14.55□□□□□ -0.08
KCMF1Q9P0J7 SAMD11P1-201ENST00000571429 661 ntBASIC14.55□□□□□ -0.08
KCMF1Q9P0J7 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
KCMF1Q9P0J7 WFDC1-204ENST00000613603 549 ntBASIC14.55□□□□□ -0.08
KCMF1Q9P0J7 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
KCMF1Q9P0J7 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
KCMF1Q9P0J7 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
KCMF1Q9P0J7 AC063926.2-201ENST00000623766 1308 ntBASIC14.55□□□□□ -0.08
KCMF1Q9P0J7 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
KCMF1Q9P0J7 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
KCMF1Q9P0J7 HNRNPA1P48-201ENST00000562726 1377 ntBASIC14.55□□□□□ -0.08
KCMF1Q9P0J7 PARN-202ENST00000420015 2360 ntTSL 2 BASIC14.55□□□□□ -0.08
KCMF1Q9P0J7 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
KCMF1Q9P0J7 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
KCMF1Q9P0J7 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC14.55□□□□□ -0.08
KCMF1Q9P0J7 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
KCMF1Q9P0J7 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
KCMF1Q9P0J7 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC14.55□□□□□ -0.08
KCMF1Q9P0J7 AC007787.1-201ENST00000588095 1583 ntBASIC14.55□□□□□ -0.08
KCMF1Q9P0J7 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
KCMF1Q9P0J7 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC14.55□□□□□ -0.08
KCMF1Q9P0J7 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
KCMF1Q9P0J7 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms