Protein–RNA interactions for Protein: Q9NP50

FAM60A, Protein FAM60A, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM60AQ9NP50 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
FAM60AQ9NP50 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
FAM60AQ9NP50 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC14.53□□□□□ -0.08
FAM60AQ9NP50 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
FAM60AQ9NP50 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
FAM60AQ9NP50 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
FAM60AQ9NP50 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
FAM60AQ9NP50 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
FAM60AQ9NP50 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
FAM60AQ9NP50 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC14.53□□□□□ -0.08
FAM60AQ9NP50 AL137783.1-201ENST00000623494 1896 ntBASIC14.53□□□□□ -0.08
FAM60AQ9NP50 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC14.53□□□□□ -0.08
FAM60AQ9NP50 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
FAM60AQ9NP50 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC14.53□□□□□ -0.08
FAM60AQ9NP50 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC14.53□□□□□ -0.08
FAM60AQ9NP50 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
FAM60AQ9NP50 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
FAM60AQ9NP50 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC14.53□□□□□ -0.08
FAM60AQ9NP50 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC14.53□□□□□ -0.08
FAM60AQ9NP50 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC14.53□□□□□ -0.08
FAM60AQ9NP50 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
FAM60AQ9NP50 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
FAM60AQ9NP50 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
FAM60AQ9NP50 MPV17-205ENST00000402310 906 ntTSL 5 BASIC14.53□□□□□ -0.08
FAM60AQ9NP50 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
FAM60AQ9NP50 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC14.53□□□□□ -0.08
FAM60AQ9NP50 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
FAM60AQ9NP50 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC14.53□□□□□ -0.08
FAM60AQ9NP50 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC14.53□□□□□ -0.08
FAM60AQ9NP50 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC14.53□□□□□ -0.08
FAM60AQ9NP50 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC14.53□□□□□ -0.08
FAM60AQ9NP50 AC079316.1-201ENST00000548397 411 ntBASIC14.53□□□□□ -0.08
FAM60AQ9NP50 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC14.53□□□□□ -0.08
FAM60AQ9NP50 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC14.53□□□□□ -0.08
FAM60AQ9NP50 DUX4L47-201ENST00000566374 394 ntBASIC14.53□□□□□ -0.08
FAM60AQ9NP50 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
FAM60AQ9NP50 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC14.53□□□□□ -0.08
FAM60AQ9NP50 AC004466.1-201ENST00000599515 1080 ntBASIC14.53□□□□□ -0.08
FAM60AQ9NP50 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
FAM60AQ9NP50 ENPP7P14-201ENST00000621765 1040 ntBASIC14.53□□□□□ -0.08
FAM60AQ9NP50 AC006453.4-201ENST00000636949 1252 ntBASIC14.53□□□□□ -0.08
FAM60AQ9NP50 AC008687.7-202ENST00000637404 953 ntBASIC14.53□□□□□ -0.08
FAM60AQ9NP50 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
FAM60AQ9NP50 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
FAM60AQ9NP50 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
FAM60AQ9NP50 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
FAM60AQ9NP50 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC14.53□□□□□ -0.08
FAM60AQ9NP50 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC14.53□□□□□ -0.08
FAM60AQ9NP50 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
FAM60AQ9NP50 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC14.53□□□□□ -0.08
FAM60AQ9NP50 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
FAM60AQ9NP50 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC14.53□□□□□ -0.08
FAM60AQ9NP50 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
FAM60AQ9NP50 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC14.53□□□□□ -0.08
FAM60AQ9NP50 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
FAM60AQ9NP50 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC14.52□□□□□ -0.08
FAM60AQ9NP50 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
FAM60AQ9NP50 REXO1L6P-201ENST00000603433 1515 ntBASIC14.52□□□□□ -0.08
FAM60AQ9NP50 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.08
FAM60AQ9NP50 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
FAM60AQ9NP50 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC14.52□□□□□ -0.08
FAM60AQ9NP50 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC14.52□□□□□ -0.08
FAM60AQ9NP50 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
FAM60AQ9NP50 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
FAM60AQ9NP50 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
FAM60AQ9NP50 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
FAM60AQ9NP50 TPM3P8-201ENST00000330554 643 ntBASIC14.52□□□□□ -0.09
FAM60AQ9NP50 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
FAM60AQ9NP50 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
FAM60AQ9NP50 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
FAM60AQ9NP50 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
FAM60AQ9NP50 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC14.52□□□□□ -0.09
FAM60AQ9NP50 TPO-206ENST00000382269 1155 ntTSL 5 BASIC14.52□□□□□ -0.09
FAM60AQ9NP50 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
FAM60AQ9NP50 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
FAM60AQ9NP50 MIR1202-201ENST00000408529 83 ntBASIC14.52□□□□□ -0.09
FAM60AQ9NP50 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC14.52□□□□□ -0.09
FAM60AQ9NP50 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC14.52□□□□□ -0.09
FAM60AQ9NP50 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
FAM60AQ9NP50 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
FAM60AQ9NP50 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC14.52□□□□□ -0.09
FAM60AQ9NP50 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
FAM60AQ9NP50 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
FAM60AQ9NP50 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
FAM60AQ9NP50 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
FAM60AQ9NP50 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
FAM60AQ9NP50 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC14.52□□□□□ -0.09
FAM60AQ9NP50 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.09
FAM60AQ9NP50 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC14.52□□□□□ -0.09
FAM60AQ9NP50 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
FAM60AQ9NP50 REXO1L2P-201ENST00000425429 2069 ntBASIC14.52□□□□□ -0.09
FAM60AQ9NP50 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC14.52□□□□□ -0.09
FAM60AQ9NP50 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
FAM60AQ9NP50 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
FAM60AQ9NP50 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC14.52□□□□□ -0.09
FAM60AQ9NP50 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
FAM60AQ9NP50 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
FAM60AQ9NP50 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
FAM60AQ9NP50 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
FAM60AQ9NP50 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms