Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
CHD8Q9HCK8 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CHD8Q9HCK8 LINC01746-201ENST00000621390 449 ntTSL 3 BASIC13.89□□□□□ -0.19
CHD8Q9HCK8 PROX1-AS1-235ENST00000628896 711 ntTSL 5 BASIC13.89□□□□□ -0.19
CHD8Q9HCK8 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
CHD8Q9HCK8 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CHD8Q9HCK8 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CHD8Q9HCK8 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CHD8Q9HCK8 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CHD8Q9HCK8 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CHD8Q9HCK8 AC018629.1-201ENST00000623381 1736 ntBASIC13.89□□□□□ -0.19
CHD8Q9HCK8 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CHD8Q9HCK8 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CHD8Q9HCK8 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC13.89□□□□□ -0.19
CHD8Q9HCK8 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CHD8Q9HCK8 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
CHD8Q9HCK8 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
CHD8Q9HCK8 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CHD8Q9HCK8 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC13.89□□□□□ -0.19
CHD8Q9HCK8 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CHD8Q9HCK8 BCCIP-203ENST00000368759 1433 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CHD8Q9HCK8 AL121949.3-201ENST00000406684 385 ntBASIC13.89□□□□□ -0.19
CHD8Q9HCK8 PAX5-210ENST00000520281 969 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CHD8Q9HCK8 DUXAP9-201ENST00000547220 665 ntTSL 3 BASIC13.89□□□□□ -0.19
CHD8Q9HCK8 AC007728.1-202ENST00000564510 787 ntTSL 3 BASIC13.89□□□□□ -0.19
CHD8Q9HCK8 RNF165-205ENST00000588679 2904 ntBASIC13.89□□□□□ -0.19
CHD8Q9HCK8 AP000322.3-201ENST00000608665 388 ntBASIC13.89□□□□□ -0.19
CHD8Q9HCK8 AC005865.2-202ENST00000635814 725 ntBASIC13.89□□□□□ -0.19
CHD8Q9HCK8 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
CHD8Q9HCK8 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CHD8Q9HCK8 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
CHD8Q9HCK8 AC007613.1-201ENST00000572811 2597 ntBASIC13.89□□□□□ -0.19
CHD8Q9HCK8 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC13.89□□□□□ -0.19
CHD8Q9HCK8 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CHD8Q9HCK8 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
CHD8Q9HCK8 ATP5A1-201ENST00000282050 1945 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
CHD8Q9HCK8 PRMT2-216ENST00000621201 1301 ntTSL 5 BASIC13.88□□□□□ -0.19
CHD8Q9HCK8 HNRNPABP1-201ENST00000406003 734 ntBASIC13.88□□□□□ -0.19
CHD8Q9HCK8 KRT18P36-201ENST00000411618 1276 ntBASIC13.88□□□□□ -0.19
CHD8Q9HCK8 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC13.88□□□□□ -0.19
CHD8Q9HCK8 AC022113.2-201ENST00000504935 704 ntTSL 3 BASIC13.88□□□□□ -0.19
CHD8Q9HCK8 AL121796.1-201ENST00000505702 466 ntTSL 3 BASIC13.88□□□□□ -0.19
CHD8Q9HCK8 TMA16-204ENST00000508268 608 ntTSL 2 BASIC13.88□□□□□ -0.19
CHD8Q9HCK8 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC13.88□□□□□ -0.19
CHD8Q9HCK8 AC073896.4-201ENST00000553176 403 ntTSL 2 BASIC13.88□□□□□ -0.19
CHD8Q9HCK8 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC13.88□□□□□ -0.19
CHD8Q9HCK8 NAT9-219ENST00000582524 573 ntTSL 4 BASIC13.88□□□□□ -0.19
CHD8Q9HCK8 AC138696.2-201ENST00000607376 223 ntBASIC13.88□□□□□ -0.19
CHD8Q9HCK8 APOBEC3H-207ENST00000613996 465 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CHD8Q9HCK8 OR3A1-202ENST00000615105 966 ntBASIC13.88□□□□□ -0.19
CHD8Q9HCK8 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
CHD8Q9HCK8 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CHD8Q9HCK8 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC13.88□□□□□ -0.19
CHD8Q9HCK8 API5-208ENST00000531273 1868 ntTSL 2 BASIC13.88□□□□□ -0.19
CHD8Q9HCK8 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC13.88□□□□□ -0.19
CHD8Q9HCK8 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CHD8Q9HCK8 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC13.88□□□□□ -0.19
CHD8Q9HCK8 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC13.88□□□□□ -0.19
CHD8Q9HCK8 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CHD8Q9HCK8 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
CHD8Q9HCK8 ANKDD1A-202ENST00000395720 1518 ntTSL 5 BASIC13.88□□□□□ -0.19
CHD8Q9HCK8 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CHD8Q9HCK8 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CHD8Q9HCK8 NECTIN1-203ENST00000341398 1377 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CHD8Q9HCK8 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CHD8Q9HCK8 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CHD8Q9HCK8 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CHD8Q9HCK8 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CHD8Q9HCK8 TEX33-201ENST00000381821 978 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CHD8Q9HCK8 TRBV4-1-201ENST00000390357 373 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
CHD8Q9HCK8 TRBV4-2-201ENST00000390392 455 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
CHD8Q9HCK8 AC136604.1-202ENST00000425471 771 ntBASIC13.88□□□□□ -0.19
CHD8Q9HCK8 AC103923.1-201ENST00000453229 1228 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CHD8Q9HCK8 SCARNA12-201ENST00000459155 270 ntBASIC13.88□□□□□ -0.19
CHD8Q9HCK8 LY6E-215ENST00000523847 427 ntTSL 3 BASIC13.88□□□□□ -0.19
CHD8Q9HCK8 KNOP1P1-201ENST00000542108 989 ntBASIC13.88□□□□□ -0.19
CHD8Q9HCK8 FOXN3-AS2-201ENST00000554071 1262 ntBASIC13.88□□□□□ -0.19
CHD8Q9HCK8 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC13.88□□□□□ -0.19
CHD8Q9HCK8 TRMT112P3-201ENST00000580149 358 ntBASIC13.88□□□□□ -0.19
CHD8Q9HCK8 AC008825.2-201ENST00000603374 718 ntBASIC13.88□□□□□ -0.19
CHD8Q9HCK8 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC13.88□□□□□ -0.19
CHD8Q9HCK8 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CHD8Q9HCK8 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC13.88□□□□□ -0.19
CHD8Q9HCK8 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC13.88□□□□□ -0.19
CHD8Q9HCK8 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC13.88□□□□□ -0.19
CHD8Q9HCK8 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CHD8Q9HCK8 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC13.88□□□□□ -0.19
CHD8Q9HCK8 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CHD8Q9HCK8 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
CHD8Q9HCK8 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
CHD8Q9HCK8 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
CHD8Q9HCK8 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CHD8Q9HCK8 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CHD8Q9HCK8 IGLV9-49-201ENST00000427632 409 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
CHD8Q9HCK8 CD164-210ENST00000512821 964 ntTSL 2 BASIC13.87□□□□□ -0.19
CHD8Q9HCK8 PRR7-AS1-204ENST00000514846 543 ntTSL 2 BASIC13.87□□□□□ -0.19
CHD8Q9HCK8 AC090136.2-201ENST00000517809 420 ntBASIC13.87□□□□□ -0.19
CHD8Q9HCK8 HNRNPA1P16-201ENST00000575692 955 ntBASIC13.87□□□□□ -0.19
CHD8Q9HCK8 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
CHD8Q9HCK8 FAAP24-203ENST00000589646 836 ntTSL 3 BASIC13.87□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms