Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PCDH9Q9HC56 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDH9Q9HC56 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDH9Q9HC56 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC15.88■□□□□ 0.13
PCDH9Q9HC56 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDH9Q9HC56 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDH9Q9HC56 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDH9Q9HC56 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDH9Q9HC56 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PCDH9Q9HC56 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDH9Q9HC56 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDH9Q9HC56 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
PCDH9Q9HC56 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PCDH9Q9HC56 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC15.88■□□□□ 0.13
PCDH9Q9HC56 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDH9Q9HC56 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC15.88■□□□□ 0.13
PCDH9Q9HC56 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC15.88■□□□□ 0.13
PCDH9Q9HC56 TIMM17BP1-201ENST00000545713 516 ntBASIC15.88■□□□□ 0.13
PCDH9Q9HC56 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC15.88■□□□□ 0.13
PCDH9Q9HC56 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC15.88■□□□□ 0.13
PCDH9Q9HC56 AC025181.2-201ENST00000606994 802 ntBASIC15.88■□□□□ 0.13
PCDH9Q9HC56 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC15.88■□□□□ 0.13
PCDH9Q9HC56 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
PCDH9Q9HC56 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDH9Q9HC56 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDH9Q9HC56 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
PCDH9Q9HC56 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDH9Q9HC56 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PCDH9Q9HC56 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC15.88■□□□□ 0.13
PCDH9Q9HC56 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
PCDH9Q9HC56 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
PCDH9Q9HC56 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDH9Q9HC56 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDH9Q9HC56 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDH9Q9HC56 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PCDH9Q9HC56 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC15.88■□□□□ 0.13
PCDH9Q9HC56 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDH9Q9HC56 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDH9Q9HC56 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
PCDH9Q9HC56 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC15.87■□□□□ 0.13
PCDH9Q9HC56 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDH9Q9HC56 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
PCDH9Q9HC56 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC15.87■□□□□ 0.13
PCDH9Q9HC56 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDH9Q9HC56 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC15.87■□□□□ 0.13
PCDH9Q9HC56 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PCDH9Q9HC56 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
PCDH9Q9HC56 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDH9Q9HC56 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PCDH9Q9HC56 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PCDH9Q9HC56 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
PCDH9Q9HC56 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDH9Q9HC56 ZBTB45P1-201ENST00000452761 1456 ntBASIC15.87■□□□□ 0.13
PCDH9Q9HC56 CYP2AB1P-202ENST00000454440 1456 ntBASIC15.87■□□□□ 0.13
PCDH9Q9HC56 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PCDH9Q9HC56 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PCDH9Q9HC56 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC15.87■□□□□ 0.13
PCDH9Q9HC56 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
PCDH9Q9HC56 BCRP1-201ENST00000444246 691 ntBASIC15.87■□□□□ 0.13
PCDH9Q9HC56 PFN2-205ENST00000461868 613 ntTSL 2 BASIC15.87■□□□□ 0.13
PCDH9Q9HC56 KRT18P43-201ENST00000469825 1281 ntBASIC15.87■□□□□ 0.13
PCDH9Q9HC56 SPDYE18-201ENST00000510091 1050 ntBASIC15.87■□□□□ 0.13
PCDH9Q9HC56 REEP4-207ENST00000523293 913 ntTSL 3 BASIC15.87■□□□□ 0.13
PCDH9Q9HC56 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC15.87■□□□□ 0.13
PCDH9Q9HC56 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDH9Q9HC56 SPCS2P1-201ENST00000561636 679 ntBASIC15.87■□□□□ 0.13
PCDH9Q9HC56 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC15.87■□□□□ 0.13
PCDH9Q9HC56 AL096865.1-201ENST00000606796 927 ntBASIC15.87■□□□□ 0.13
PCDH9Q9HC56 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC15.87■□□□□ 0.13
PCDH9Q9HC56 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDH9Q9HC56 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PCDH9Q9HC56 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDH9Q9HC56 USP35-204ENST00000530267 2419 ntTSL 2 BASIC15.87■□□□□ 0.13
PCDH9Q9HC56 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC15.87■□□□□ 0.13
PCDH9Q9HC56 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC15.87■□□□□ 0.13
PCDH9Q9HC56 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PCDH9Q9HC56 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
PCDH9Q9HC56 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDH9Q9HC56 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC15.87■□□□□ 0.13
PCDH9Q9HC56 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC15.87■□□□□ 0.13
PCDH9Q9HC56 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
PCDH9Q9HC56 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC15.87■□□□□ 0.13
PCDH9Q9HC56 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDH9Q9HC56 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDH9Q9HC56 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PCDH9Q9HC56 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC15.86■□□□□ 0.13
PCDH9Q9HC56 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PCDH9Q9HC56 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC15.86■□□□□ 0.13
PCDH9Q9HC56 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
PCDH9Q9HC56 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PCDH9Q9HC56 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
PCDH9Q9HC56 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PCDH9Q9HC56 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
PCDH9Q9HC56 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC15.86■□□□□ 0.13
PCDH9Q9HC56 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PCDH9Q9HC56 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
PCDH9Q9HC56 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PCDH9Q9HC56 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PCDH9Q9HC56 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PCDH9Q9HC56 RAC2-204ENST00000406508 893 ntTSL 5 BASIC15.86■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 70.1 ms