Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
UPF3BQ9BZI7 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
UPF3BQ9BZI7 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC18.36■□□□□ 0.53
UPF3BQ9BZI7 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
UPF3BQ9BZI7 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
UPF3BQ9BZI7 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
UPF3BQ9BZI7 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
UPF3BQ9BZI7 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
UPF3BQ9BZI7 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
UPF3BQ9BZI7 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
UPF3BQ9BZI7 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
UPF3BQ9BZI7 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
UPF3BQ9BZI7 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
UPF3BQ9BZI7 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
UPF3BQ9BZI7 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC18.36■□□□□ 0.53
UPF3BQ9BZI7 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
UPF3BQ9BZI7 SPDYE18-201ENST00000510091 1050 ntBASIC18.36■□□□□ 0.53
UPF3BQ9BZI7 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC18.36■□□□□ 0.53
UPF3BQ9BZI7 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC18.36■□□□□ 0.53
UPF3BQ9BZI7 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
UPF3BQ9BZI7 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
UPF3BQ9BZI7 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
UPF3BQ9BZI7 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC18.36■□□□□ 0.53
UPF3BQ9BZI7 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC18.36■□□□□ 0.53
UPF3BQ9BZI7 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
UPF3BQ9BZI7 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC18.36■□□□□ 0.53
UPF3BQ9BZI7 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC18.36■□□□□ 0.53
UPF3BQ9BZI7 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
UPF3BQ9BZI7 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC18.36■□□□□ 0.53
UPF3BQ9BZI7 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
UPF3BQ9BZI7 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC18.36■□□□□ 0.53
UPF3BQ9BZI7 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
UPF3BQ9BZI7 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
UPF3BQ9BZI7 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
UPF3BQ9BZI7 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
UPF3BQ9BZI7 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
UPF3BQ9BZI7 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC18.35■□□□□ 0.53
UPF3BQ9BZI7 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
UPF3BQ9BZI7 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC18.35■□□□□ 0.53
UPF3BQ9BZI7 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC18.35■□□□□ 0.53
UPF3BQ9BZI7 AC007292.2-201ENST00000593524 1812 ntBASIC18.35■□□□□ 0.53
UPF3BQ9BZI7 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
UPF3BQ9BZI7 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC18.35■□□□□ 0.53
UPF3BQ9BZI7 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
UPF3BQ9BZI7 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
UPF3BQ9BZI7 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
UPF3BQ9BZI7 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
UPF3BQ9BZI7 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
UPF3BQ9BZI7 AC138969.3-201ENST00000546612 1459 ntBASIC18.35■□□□□ 0.53
UPF3BQ9BZI7 AC138932.2-201ENST00000548268 1459 ntBASIC18.35■□□□□ 0.53
UPF3BQ9BZI7 AC126755.4-201ENST00000549796 1459 ntBASIC18.35■□□□□ 0.53
UPF3BQ9BZI7 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC18.35■□□□□ 0.53
UPF3BQ9BZI7 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
UPF3BQ9BZI7 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
UPF3BQ9BZI7 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
UPF3BQ9BZI7 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
UPF3BQ9BZI7 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
UPF3BQ9BZI7 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
UPF3BQ9BZI7 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
UPF3BQ9BZI7 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
UPF3BQ9BZI7 AL589987.1-201ENST00000453380 819 ntBASIC18.35■□□□□ 0.53
UPF3BQ9BZI7 AC067863.1-201ENST00000494933 530 ntBASIC18.35■□□□□ 0.53
UPF3BQ9BZI7 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC18.35■□□□□ 0.53
UPF3BQ9BZI7 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC18.35■□□□□ 0.53
UPF3BQ9BZI7 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
UPF3BQ9BZI7 AC005225.4-201ENST00000557330 545 ntBASIC18.35■□□□□ 0.53
UPF3BQ9BZI7 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC18.35■□□□□ 0.53
UPF3BQ9BZI7 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC18.35■□□□□ 0.53
UPF3BQ9BZI7 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
UPF3BQ9BZI7 INTS4P1-203ENST00000641008 3683 ntBASIC18.35■□□□□ 0.53
UPF3BQ9BZI7 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
UPF3BQ9BZI7 AC015656.1-201ENST00000624209 3578 ntBASIC18.35■□□□□ 0.53
UPF3BQ9BZI7 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
UPF3BQ9BZI7 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
UPF3BQ9BZI7 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
UPF3BQ9BZI7 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
UPF3BQ9BZI7 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
UPF3BQ9BZI7 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC18.35■□□□□ 0.53
UPF3BQ9BZI7 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC18.35■□□□□ 0.53
UPF3BQ9BZI7 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
UPF3BQ9BZI7 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
UPF3BQ9BZI7 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
UPF3BQ9BZI7 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
UPF3BQ9BZI7 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
UPF3BQ9BZI7 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
UPF3BQ9BZI7 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
UPF3BQ9BZI7 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC18.34■□□□□ 0.53
UPF3BQ9BZI7 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
UPF3BQ9BZI7 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
UPF3BQ9BZI7 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
UPF3BQ9BZI7 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
UPF3BQ9BZI7 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC18.34■□□□□ 0.53
UPF3BQ9BZI7 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
UPF3BQ9BZI7 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC18.34■□□□□ 0.53
UPF3BQ9BZI7 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC18.34■□□□□ 0.53
UPF3BQ9BZI7 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC18.34■□□□□ 0.53
UPF3BQ9BZI7 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC18.34■□□□□ 0.53
UPF3BQ9BZI7 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
UPF3BQ9BZI7 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC18.34■□□□□ 0.53
UPF3BQ9BZI7 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms