Protein–RNA interactions for Protein: Q99698

LYST, Lysosomal-trafficking regulator, humanhuman

Predictions only

Length 3,801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSTQ99698 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC10.35□□□□□ -0.75
LYSTQ99698 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
LYSTQ99698 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
LYSTQ99698 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
LYSTQ99698 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
LYSTQ99698 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC10.35□□□□□ -0.75
LYSTQ99698 RBM14-204ENST00000409738 372 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
LYSTQ99698 AC090857.1-201ENST00000527400 390 ntBASIC10.35□□□□□ -0.75
LYSTQ99698 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC10.35□□□□□ -0.75
LYSTQ99698 AC023389.1-201ENST00000577846 576 ntTSL 4 BASIC10.35□□□□□ -0.75
LYSTQ99698 SNX11-210ENST00000582104 1282 ntTSL 2 BASIC10.35□□□□□ -0.75
LYSTQ99698 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC10.35□□□□□ -0.75
LYSTQ99698 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
LYSTQ99698 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC10.35□□□□□ -0.75
LYSTQ99698 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
LYSTQ99698 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
LYSTQ99698 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC10.35□□□□□ -0.75
LYSTQ99698 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
LYSTQ99698 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
LYSTQ99698 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
LYSTQ99698 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC10.35□□□□□ -0.75
LYSTQ99698 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC10.35□□□□□ -0.75
LYSTQ99698 AL008718.2-201ENST00000609206 1313 ntBASIC10.35□□□□□ -0.75
LYSTQ99698 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
LYSTQ99698 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
LYSTQ99698 CTSL-202ENST00000342020 933 ntTSL 2 BASIC10.35□□□□□ -0.75
LYSTQ99698 COX20P1-201ENST00000366529 357 ntBASIC10.35□□□□□ -0.75
LYSTQ99698 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
LYSTQ99698 HNRNPA1P58-201ENST00000403629 610 ntBASIC10.35□□□□□ -0.75
LYSTQ99698 NDUFS7-203ENST00000414651 841 ntTSL 5 BASIC10.35□□□□□ -0.75
LYSTQ99698 AC093909.3-201ENST00000504783 336 ntBASIC10.35□□□□□ -0.75
LYSTQ99698 POLD4-208ENST00000532830 904 ntTSL 3 BASIC10.35□□□□□ -0.75
LYSTQ99698 AC008805.1-201ENST00000590892 364 ntBASIC10.35□□□□□ -0.75
LYSTQ99698 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC10.35□□□□□ -0.75
LYSTQ99698 AL136295.7-201ENST00000619226 1200 ntBASIC10.35□□□□□ -0.75
LYSTQ99698 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
LYSTQ99698 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
LYSTQ99698 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
LYSTQ99698 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC10.35□□□□□ -0.75
LYSTQ99698 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC10.35□□□□□ -0.75
LYSTQ99698 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
LYSTQ99698 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC10.34□□□□□ -0.75
LYSTQ99698 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
LYSTQ99698 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC10.34□□□□□ -0.75
LYSTQ99698 HIST2H2BA-201ENST00000412169 381 ntBASIC10.34□□□□□ -0.75
LYSTQ99698 LINC02557-201ENST00000432249 477 ntTSL 3 BASIC10.34□□□□□ -0.75
LYSTQ99698 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC10.34□□□□□ -0.75
LYSTQ99698 AC009560.1-201ENST00000620208 434 ntBASIC10.34□□□□□ -0.75
LYSTQ99698 AC233280.19-201ENST00000633223 136 ntBASIC10.34□□□□□ -0.75
LYSTQ99698 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
LYSTQ99698 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC10.34□□□□□ -0.75
LYSTQ99698 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC10.34□□□□□ -0.75
LYSTQ99698 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
LYSTQ99698 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
LYSTQ99698 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
LYSTQ99698 LINC00554-201ENST00000564841 3011 ntBASIC10.34□□□□□ -0.75
LYSTQ99698 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
LYSTQ99698 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC10.34□□□□□ -0.75
LYSTQ99698 ENPP7P8-202ENST00000527856 1345 ntBASIC10.34□□□□□ -0.75
LYSTQ99698 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
LYSTQ99698 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC10.34□□□□□ -0.75
LYSTQ99698 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
LYSTQ99698 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
LYSTQ99698 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
LYSTQ99698 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
LYSTQ99698 HNRNPA1P41-201ENST00000397777 928 ntBASIC10.34□□□□□ -0.75
LYSTQ99698 AL139094.1-201ENST00000405549 1188 ntBASIC10.34□□□□□ -0.75
LYSTQ99698 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC10.34□□□□□ -0.75
LYSTQ99698 NAA38-205ENST00000575771 852 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
LYSTQ99698 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC10.34□□□□□ -0.75
LYSTQ99698 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
LYSTQ99698 AC091951.1-201ENST00000512854 2465 ntBASIC10.34□□□□□ -0.75
LYSTQ99698 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
LYSTQ99698 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC10.34□□□□□ -0.75
LYSTQ99698 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
LYSTQ99698 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC10.34□□□□□ -0.75
LYSTQ99698 AC026470.1-201ENST00000478038 846 ntBASIC10.34□□□□□ -0.75
LYSTQ99698 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC10.34□□□□□ -0.75
LYSTQ99698 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC10.34□□□□□ -0.75
LYSTQ99698 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC10.34□□□□□ -0.75
LYSTQ99698 POLR2E-204ENST00000586746 1096 ntAPPRIS P1 TSL 3 BASIC10.34□□□□□ -0.75
LYSTQ99698 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
LYSTQ99698 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
LYSTQ99698 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.75
LYSTQ99698 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC10.33□□□□□ -0.76
LYSTQ99698 AMT-239ENST00000636865 1914 ntTSL 5 BASIC10.33□□□□□ -0.76
LYSTQ99698 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
LYSTQ99698 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC10.33□□□□□ -0.76
LYSTQ99698 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
LYSTQ99698 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC10.33□□□□□ -0.76
LYSTQ99698 OBSCN-AS1-201ENST00000295012 889 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
LYSTQ99698 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
LYSTQ99698 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC10.33□□□□□ -0.76
LYSTQ99698 MYOZ3-209ENST00000615557 1031 ntTSL 2 BASIC10.33□□□□□ -0.76
LYSTQ99698 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC10.33□□□□□ -0.76
LYSTQ99698 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
LYSTQ99698 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC10.33□□□□□ -0.76
LYSTQ99698 EDNRB-204ENST00000626030 1571 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
LYSTQ99698 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
LYSTQ99698 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC10.33□□□□□ -0.76
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms