Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CSMD1Q96PZ7 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC12.8□□□□□ -0.36
CSMD1Q96PZ7 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CSMD1Q96PZ7 TNNT2-203ENST00000367315 1083 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
CSMD1Q96PZ7 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
CSMD1Q96PZ7 RBM14-204ENST00000409738 372 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CSMD1Q96PZ7 TRPM2-AS-201ENST00000423310 586 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CSMD1Q96PZ7 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC12.8□□□□□ -0.36
CSMD1Q96PZ7 SHBG-210ENST00000572262 984 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CSMD1Q96PZ7 MBP-238ENST00000580402 915 ntTSL 5 BASIC12.8□□□□□ -0.36
CSMD1Q96PZ7 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC12.8□□□□□ -0.36
CSMD1Q96PZ7 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CSMD1Q96PZ7 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CSMD1Q96PZ7 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
CSMD1Q96PZ7 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CSMD1Q96PZ7 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC12.79□□□□□ -0.36
CSMD1Q96PZ7 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC12.79□□□□□ -0.36
CSMD1Q96PZ7 RPA3-202ENST00000396682 847 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
CSMD1Q96PZ7 PLA2G2A-202ENST00000400520 974 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CSMD1Q96PZ7 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC12.79□□□□□ -0.36
CSMD1Q96PZ7 GCSHP3-201ENST00000431120 391 ntBASIC12.79□□□□□ -0.36
CSMD1Q96PZ7 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC12.79□□□□□ -0.36
CSMD1Q96PZ7 ANAPC11-221ENST00000584314 559 ntTSL 2 BASIC12.79□□□□□ -0.36
CSMD1Q96PZ7 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC12.79□□□□□ -0.36
CSMD1Q96PZ7 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
CSMD1Q96PZ7 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CSMD1Q96PZ7 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CSMD1Q96PZ7 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC12.79□□□□□ -0.36
CSMD1Q96PZ7 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC12.79□□□□□ -0.36
CSMD1Q96PZ7 AC090857.1-201ENST00000527400 390 ntBASIC12.79□□□□□ -0.36
CSMD1Q96PZ7 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC12.79□□□□□ -0.36
CSMD1Q96PZ7 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC12.79□□□□□ -0.36
CSMD1Q96PZ7 AC136944.4-201ENST00000568893 660 ntTSL 4 BASIC12.79□□□□□ -0.36
CSMD1Q96PZ7 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC12.79□□□□□ -0.36
CSMD1Q96PZ7 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
CSMD1Q96PZ7 REXO1L5P-201ENST00000622260 2098 ntBASIC12.79□□□□□ -0.36
CSMD1Q96PZ7 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CSMD1Q96PZ7 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
CSMD1Q96PZ7 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
CSMD1Q96PZ7 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
CSMD1Q96PZ7 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CSMD1Q96PZ7 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC12.79□□□□□ -0.36
CSMD1Q96PZ7 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
CSMD1Q96PZ7 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC12.79□□□□□ -0.36
CSMD1Q96PZ7 AC144522.1-201ENST00000625111 1658 ntBASIC12.79□□□□□ -0.36
CSMD1Q96PZ7 ALG11-203ENST00000523764 1404 ntTSL 2 BASIC12.79□□□□□ -0.36
CSMD1Q96PZ7 TNNI2-201ENST00000252898 678 ntAPPRIS P3 TSL 3 BASIC12.79□□□□□ -0.36
CSMD1Q96PZ7 TNNI2-202ENST00000381905 706 ntAPPRIS ALT1 TSL 3 BASIC12.79□□□□□ -0.36
CSMD1Q96PZ7 TNNI2-203ENST00000381906 745 ntAPPRIS P3 TSL 3 BASIC12.79□□□□□ -0.36
CSMD1Q96PZ7 TNNI2-204ENST00000381911 743 ntAPPRIS P3 TSL 2 BASIC12.79□□□□□ -0.36
CSMD1Q96PZ7 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
CSMD1Q96PZ7 AC023141.7-201ENST00000430646 407 ntBASIC12.79□□□□□ -0.36
CSMD1Q96PZ7 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
CSMD1Q96PZ7 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC12.79□□□□□ -0.36
CSMD1Q96PZ7 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CSMD1Q96PZ7 FAM90A2P-201ENST00000511144 1395 ntBASIC12.79□□□□□ -0.36
CSMD1Q96PZ7 FAM90A25P-201ENST00000528404 1395 ntBASIC12.79□□□□□ -0.36
CSMD1Q96PZ7 DOC2GP-204ENST00000639052 2548 ntBASIC12.78□□□□□ -0.36
CSMD1Q96PZ7 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CSMD1Q96PZ7 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CSMD1Q96PZ7 AMT-239ENST00000636865 1914 ntTSL 5 BASIC12.78□□□□□ -0.36
CSMD1Q96PZ7 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CSMD1Q96PZ7 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CSMD1Q96PZ7 GCK-209ENST00000616242 2260 ntTSL 5 BASIC12.78□□□□□ -0.36
CSMD1Q96PZ7 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CSMD1Q96PZ7 AC092265.1-201ENST00000422638 498 ntTSL 2 BASIC12.78□□□□□ -0.36
CSMD1Q96PZ7 OST4-201ENST00000429985 559 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
CSMD1Q96PZ7 DMKN-256ENST00000492341 738 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
CSMD1Q96PZ7 LINC02228-201ENST00000507600 534 ntTSL 2 BASIC12.78□□□□□ -0.36
CSMD1Q96PZ7 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC12.78□□□□□ -0.36
CSMD1Q96PZ7 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC12.78□□□□□ -0.36
CSMD1Q96PZ7 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CSMD1Q96PZ7 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
CSMD1Q96PZ7 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CSMD1Q96PZ7 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
CSMD1Q96PZ7 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CSMD1Q96PZ7 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CSMD1Q96PZ7 LINC01144-201ENST00000626198 1710 ntBASIC12.78□□□□□ -0.36
CSMD1Q96PZ7 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CSMD1Q96PZ7 LCE2C-201ENST00000368783 614 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CSMD1Q96PZ7 ATP5J-202ENST00000400087 826 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
CSMD1Q96PZ7 AL451069.3-201ENST00000450206 1013 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CSMD1Q96PZ7 AC105219.2-201ENST00000527908 299 ntTSL 4 BASIC12.78□□□□□ -0.36
CSMD1Q96PZ7 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC12.78□□□□□ -0.36
CSMD1Q96PZ7 AC010335.1-201ENST00000594590 599 ntTSL 3 BASIC12.78□□□□□ -0.36
CSMD1Q96PZ7 AC106774.7-201ENST00000638408 597 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
CSMD1Q96PZ7 AC106774.6-201ENST00000638483 597 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
CSMD1Q96PZ7 AC233724.20-201ENST00000638842 597 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
CSMD1Q96PZ7 AC233724.19-201ENST00000639969 597 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
CSMD1Q96PZ7 AC106774.5-201ENST00000640558 597 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
CSMD1Q96PZ7 AC233724.18-201ENST00000640803 597 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
CSMD1Q96PZ7 AC233724.21-201ENST00000640846 597 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
CSMD1Q96PZ7 ARRB2-218ENST00000575877 1579 ntTSL 5 BASIC12.78□□□□□ -0.36
CSMD1Q96PZ7 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC12.78□□□□□ -0.36
CSMD1Q96PZ7 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
CSMD1Q96PZ7 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
CSMD1Q96PZ7 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC12.78□□□□□ -0.36
CSMD1Q96PZ7 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
CSMD1Q96PZ7 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CSMD1Q96PZ7 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC12.78□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms