Protein–RNA interactions for Protein: Q96F63

CCDC97, Coiled-coil domain-containing protein 97, humanhuman

Predicted RBP Predictions only

Length 343 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC97Q96F63 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC97Q96F63 HNRNPA3P1-201ENST00000401429 1139 ntBASIC15.81■□□□□ 0.12
CCDC97Q96F63 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
CCDC97Q96F63 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
CCDC97Q96F63 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
CCDC97Q96F63 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
CCDC97Q96F63 NME4-207ENST00000450036 985 ntTSL 3 BASIC15.81■□□□□ 0.12
CCDC97Q96F63 HNRNPA3P5-201ENST00000455201 833 ntBASIC15.81■□□□□ 0.12
CCDC97Q96F63 AL035456.1-201ENST00000456064 1369 ntBASIC15.81■□□□□ 0.12
CCDC97Q96F63 NAA50-208ENST00000497255 789 ntTSL 5 BASIC15.81■□□□□ 0.12
CCDC97Q96F63 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC15.81■□□□□ 0.12
CCDC97Q96F63 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC15.81■□□□□ 0.12
CCDC97Q96F63 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC15.81■□□□□ 0.12
CCDC97Q96F63 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC97Q96F63 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC97Q96F63 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC97Q96F63 TDG-209ENST00000544861 1387 ntTSL 2 BASIC15.81■□□□□ 0.12
CCDC97Q96F63 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC15.81■□□□□ 0.12
CCDC97Q96F63 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
CCDC97Q96F63 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC15.81■□□□□ 0.12
CCDC97Q96F63 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC97Q96F63 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC15.81■□□□□ 0.12
CCDC97Q96F63 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
CCDC97Q96F63 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC15.81■□□□□ 0.12
CCDC97Q96F63 AC026979.3-201ENST00000607315 403 ntBASIC15.81■□□□□ 0.12
CCDC97Q96F63 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
CCDC97Q96F63 GPER1-207ENST00000619052 571 ntTSL 2 BASIC15.81■□□□□ 0.12
CCDC97Q96F63 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
CCDC97Q96F63 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
CCDC97Q96F63 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC15.81■□□□□ 0.12
CCDC97Q96F63 WAPL-206ENST00000618527 6152 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC97Q96F63 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
CCDC97Q96F63 PSME4-202ENST00000404125 7099 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC97Q96F63 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC97Q96F63 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
CCDC97Q96F63 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC97Q96F63 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC15.81■□□□□ 0.12
CCDC97Q96F63 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC97Q96F63 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC97Q96F63 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC97Q96F63 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC97Q96F63 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC15.81■□□□□ 0.12
CCDC97Q96F63 DISP3-201ENST00000294484 5215 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC97Q96F63 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC97Q96F63 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC15.8■□□□□ 0.12
CCDC97Q96F63 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC15.8■□□□□ 0.12
CCDC97Q96F63 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC15.8■□□□□ 0.12
CCDC97Q96F63 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC15.8■□□□□ 0.12
CCDC97Q96F63 R3HDM2P2-201ENST00000401880 2116 ntBASIC15.8■□□□□ 0.12
CCDC97Q96F63 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC97Q96F63 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC97Q96F63 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC15.8■□□□□ 0.12
CCDC97Q96F63 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
CCDC97Q96F63 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC97Q96F63 AC092127.1-201ENST00000567093 3455 ntBASIC15.8■□□□□ 0.12
CCDC97Q96F63 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC97Q96F63 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC97Q96F63 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC15.8■□□□□ 0.12
CCDC97Q96F63 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC97Q96F63 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC97Q96F63 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC15.8■□□□□ 0.12
CCDC97Q96F63 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC97Q96F63 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC97Q96F63 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC15.8■□□□□ 0.12
CCDC97Q96F63 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC97Q96F63 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
CCDC97Q96F63 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC97Q96F63 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC15.8■□□□□ 0.12
CCDC97Q96F63 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC97Q96F63 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC97Q96F63 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC97Q96F63 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC97Q96F63 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC15.8■□□□□ 0.12
CCDC97Q96F63 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC15.8■□□□□ 0.12
CCDC97Q96F63 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC15.8■□□□□ 0.12
CCDC97Q96F63 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC15.8■□□□□ 0.12
CCDC97Q96F63 GPR53P-205ENST00000457298 1084 ntBASIC15.8■□□□□ 0.12
CCDC97Q96F63 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC15.8■□□□□ 0.12
CCDC97Q96F63 AC090142.2-201ENST00000483263 416 ntBASIC15.8■□□□□ 0.12
CCDC97Q96F63 MEIS3P1-201ENST00000495167 958 ntBASIC15.8■□□□□ 0.12
CCDC97Q96F63 HNRNPUP1-201ENST00000554987 333 ntBASIC15.8■□□□□ 0.12
CCDC97Q96F63 MIR4313-201ENST00000580760 101 ntBASIC15.8■□□□□ 0.12
CCDC97Q96F63 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC97Q96F63 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC97Q96F63 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
CCDC97Q96F63 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC97Q96F63 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC15.8■□□□□ 0.12
CCDC97Q96F63 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC97Q96F63 CETN4P-206ENST00000642099 2168 ntBASIC15.8■□□□□ 0.12
CCDC97Q96F63 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC97Q96F63 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC97Q96F63 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC97Q96F63 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC97Q96F63 EGR2-202ENST00000411732 2824 ntTSL 2 BASIC15.8■□□□□ 0.12
CCDC97Q96F63 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC15.8■□□□□ 0.12
CCDC97Q96F63 MBP-202ENST00000355994 2772 ntTSL 5 BASIC15.8■□□□□ 0.12
CCDC97Q96F63 BUB1B-PAK6-201ENST00000441369 2767 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
CCDC97Q96F63 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC15.8■□□□□ 0.12
CCDC97Q96F63 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC15.8■□□□□ 0.12
CCDC97Q96F63 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms