Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRIM43Q96BQ3 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRIM43Q96BQ3 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRIM43Q96BQ3 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
TRIM43Q96BQ3 ILF3-AS1-201ENST00000591501 1983 ntBASIC16.4■□□□□ 0.22
TRIM43Q96BQ3 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRIM43Q96BQ3 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRIM43Q96BQ3 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRIM43Q96BQ3 AL360270.3-201ENST00000609118 1348 ntBASIC16.4■□□□□ 0.22
TRIM43Q96BQ3 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRIM43Q96BQ3 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TRIM43Q96BQ3 AC022211.2-201ENST00000585075 2527 ntBASIC16.4■□□□□ 0.22
TRIM43Q96BQ3 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
TRIM43Q96BQ3 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
TRIM43Q96BQ3 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRIM43Q96BQ3 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TRIM43Q96BQ3 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TRIM43Q96BQ3 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRIM43Q96BQ3 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRIM43Q96BQ3 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC16.39■□□□□ 0.21
TRIM43Q96BQ3 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TRIM43Q96BQ3 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRIM43Q96BQ3 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRIM43Q96BQ3 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TRIM43Q96BQ3 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC16.39■□□□□ 0.21
TRIM43Q96BQ3 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC16.39■□□□□ 0.21
TRIM43Q96BQ3 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC16.39■□□□□ 0.21
TRIM43Q96BQ3 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
TRIM43Q96BQ3 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC16.39■□□□□ 0.21
TRIM43Q96BQ3 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRIM43Q96BQ3 RN7SKP230-201ENST00000365642 335 ntBASIC16.39■□□□□ 0.21
TRIM43Q96BQ3 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRIM43Q96BQ3 CRYBB3-202ENST00000404334 601 ntTSL 3 BASIC16.39■□□□□ 0.21
TRIM43Q96BQ3 SERF2-206ENST00000409291 807 ntTSL 3 BASIC16.39■□□□□ 0.21
TRIM43Q96BQ3 ZFAND2B-205ENST00000409319 771 ntTSL 2 BASIC16.39■□□□□ 0.21
TRIM43Q96BQ3 AL591242.1-203ENST00000434329 374 ntTSL 3 BASIC16.39■□□□□ 0.21
TRIM43Q96BQ3 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC16.39■□□□□ 0.21
TRIM43Q96BQ3 IMPA1-203ENST00000449740 1180 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TRIM43Q96BQ3 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC16.39■□□□□ 0.21
TRIM43Q96BQ3 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRIM43Q96BQ3 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC16.39■□□□□ 0.21
TRIM43Q96BQ3 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
TRIM43Q96BQ3 AC009041.1-201ENST00000565401 544 ntTSL 4 BASIC16.39■□□□□ 0.21
TRIM43Q96BQ3 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC16.39■□□□□ 0.21
TRIM43Q96BQ3 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
TRIM43Q96BQ3 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC16.39■□□□□ 0.21
TRIM43Q96BQ3 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRIM43Q96BQ3 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
TRIM43Q96BQ3 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRIM43Q96BQ3 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
TRIM43Q96BQ3 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRIM43Q96BQ3 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC16.39■□□□□ 0.21
TRIM43Q96BQ3 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TRIM43Q96BQ3 CHCHD7-202ENST00000355315 1535 ntTSL 2 BASIC16.39■□□□□ 0.21
TRIM43Q96BQ3 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC16.39■□□□□ 0.21
TRIM43Q96BQ3 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRIM43Q96BQ3 FAM168A-204ENST00000450446 1364 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TRIM43Q96BQ3 SLC25A20-202ENST00000430379 1576 ntTSL 3 BASIC16.38■□□□□ 0.21
TRIM43Q96BQ3 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC16.38■□□□□ 0.21
TRIM43Q96BQ3 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC16.38■□□□□ 0.21
TRIM43Q96BQ3 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TRIM43Q96BQ3 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
TRIM43Q96BQ3 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC16.38■□□□□ 0.21
TRIM43Q96BQ3 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRIM43Q96BQ3 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRIM43Q96BQ3 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
TRIM43Q96BQ3 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
TRIM43Q96BQ3 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRIM43Q96BQ3 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRIM43Q96BQ3 AC006058.4-201ENST00000624016 1670 ntBASIC16.38■□□□□ 0.21
TRIM43Q96BQ3 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
TRIM43Q96BQ3 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRIM43Q96BQ3 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC16.38■□□□□ 0.21
TRIM43Q96BQ3 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRIM43Q96BQ3 HFE-203ENST00000336625 804 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TRIM43Q96BQ3 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC16.38■□□□□ 0.21
TRIM43Q96BQ3 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
TRIM43Q96BQ3 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRIM43Q96BQ3 NPPC-202ENST00000409852 1051 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
TRIM43Q96BQ3 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRIM43Q96BQ3 MPC1L-201ENST00000423387 571 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
TRIM43Q96BQ3 TCERG1L-AS1-201ENST00000436942 472 ntTSL 2 BASIC16.38■□□□□ 0.21
TRIM43Q96BQ3 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC16.38■□□□□ 0.21
TRIM43Q96BQ3 AC018463.1-201ENST00000456674 917 ntBASIC16.38■□□□□ 0.21
TRIM43Q96BQ3 NDUFS6P1-201ENST00000485187 316 ntBASIC16.38■□□□□ 0.21
TRIM43Q96BQ3 AC108199.1-201ENST00000504249 508 ntTSL 3 BASIC16.38■□□□□ 0.21
TRIM43Q96BQ3 MEF2C-AS2-201ENST00000510274 463 ntTSL 5 BASIC16.38■□□□□ 0.21
TRIM43Q96BQ3 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC16.38■□□□□ 0.21
TRIM43Q96BQ3 ZNF124-206ENST00000543802 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRIM43Q96BQ3 AC005696.1-201ENST00000572876 443 ntTSL 2 BASIC16.38■□□□□ 0.21
TRIM43Q96BQ3 AC009884.2-201ENST00000603110 324 ntBASIC16.38■□□□□ 0.21
TRIM43Q96BQ3 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRIM43Q96BQ3 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TRIM43Q96BQ3 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRIM43Q96BQ3 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRIM43Q96BQ3 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRIM43Q96BQ3 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRIM43Q96BQ3 AC092364.2-201ENST00000596710 2692 ntBASIC16.38■□□□□ 0.21
TRIM43Q96BQ3 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRIM43Q96BQ3 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms