Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
PTP4A1Q93096 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
PTP4A1Q93096 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
PTP4A1Q93096 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
PTP4A1Q93096 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
PTP4A1Q93096 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC13.84□□□□□ -0.19
PTP4A1Q93096 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
PTP4A1Q93096 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC13.84□□□□□ -0.19
PTP4A1Q93096 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
PTP4A1Q93096 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
PTP4A1Q93096 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
PTP4A1Q93096 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
PTP4A1Q93096 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC13.84□□□□□ -0.19
PTP4A1Q93096 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
PTP4A1Q93096 AL133267.1-201ENST00000398220 340 ntBASIC13.84□□□□□ -0.19
PTP4A1Q93096 AC104457.1-201ENST00000401024 814 ntBASIC13.84□□□□□ -0.19
PTP4A1Q93096 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC13.84□□□□□ -0.19
PTP4A1Q93096 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC13.84□□□□□ -0.19
PTP4A1Q93096 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
PTP4A1Q93096 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC13.84□□□□□ -0.19
PTP4A1Q93096 SLED1-202ENST00000512051 380 ntBASIC13.84□□□□□ -0.19
PTP4A1Q93096 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC13.84□□□□□ -0.19
PTP4A1Q93096 AC109322.1-201ENST00000524499 1264 ntBASIC13.84□□□□□ -0.19
PTP4A1Q93096 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC13.84□□□□□ -0.19
PTP4A1Q93096 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
PTP4A1Q93096 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC13.84□□□□□ -0.19
PTP4A1Q93096 PRR29-209ENST00000582540 967 ntTSL 2 BASIC13.84□□□□□ -0.19
PTP4A1Q93096 UBL5-208ENST00000593087 320 ntTSL 3 BASIC13.84□□□□□ -0.19
PTP4A1Q93096 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC13.84□□□□□ -0.19
PTP4A1Q93096 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
PTP4A1Q93096 MIR6080-201ENST00000617359 66 ntBASIC13.84□□□□□ -0.19
PTP4A1Q93096 SERF2-217ENST00000630046 862 ntTSL 5 BASIC13.84□□□□□ -0.19
PTP4A1Q93096 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC13.84□□□□□ -0.19
PTP4A1Q93096 AL645728.2-202ENST00000641679 227 ntBASIC13.84□□□□□ -0.19
PTP4A1Q93096 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
PTP4A1Q93096 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
PTP4A1Q93096 AC097359.2-201ENST00000604992 2389 ntBASIC13.84□□□□□ -0.19
PTP4A1Q93096 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
PTP4A1Q93096 INTS4P1-203ENST00000641008 3683 ntBASIC13.84□□□□□ -0.19
PTP4A1Q93096 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC13.84□□□□□ -0.19
PTP4A1Q93096 AC012508.2-201ENST00000567613 1472 ntBASIC13.84□□□□□ -0.19
PTP4A1Q93096 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC13.84□□□□□ -0.19
PTP4A1Q93096 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
PTP4A1Q93096 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
PTP4A1Q93096 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
PTP4A1Q93096 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
PTP4A1Q93096 AC117489.1-201ENST00000625169 3217 ntBASIC13.84□□□□□ -0.19
PTP4A1Q93096 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
PTP4A1Q93096 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC13.84□□□□□ -0.19
PTP4A1Q93096 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
PTP4A1Q93096 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC13.84□□□□□ -0.19
PTP4A1Q93096 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC13.84□□□□□ -0.19
PTP4A1Q93096 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
PTP4A1Q93096 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC13.84□□□□□ -0.19
PTP4A1Q93096 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.19
PTP4A1Q93096 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.19
PTP4A1Q93096 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
PTP4A1Q93096 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
PTP4A1Q93096 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC13.83□□□□□ -0.2
PTP4A1Q93096 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC13.83□□□□□ -0.2
PTP4A1Q93096 SLC9A7P1-202ENST00000556476 2239 ntBASIC13.83□□□□□ -0.2
PTP4A1Q93096 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC13.83□□□□□ -0.2
PTP4A1Q93096 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
PTP4A1Q93096 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
PTP4A1Q93096 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC13.83□□□□□ -0.2
PTP4A1Q93096 AC107918.4-201ENST00000641966 3141 ntBASIC13.83□□□□□ -0.2
PTP4A1Q93096 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
PTP4A1Q93096 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC13.83□□□□□ -0.2
PTP4A1Q93096 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
PTP4A1Q93096 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
PTP4A1Q93096 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
PTP4A1Q93096 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC13.83□□□□□ -0.2
PTP4A1Q93096 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
PTP4A1Q93096 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
PTP4A1Q93096 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC13.83□□□□□ -0.2
PTP4A1Q93096 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC13.83□□□□□ -0.2
PTP4A1Q93096 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC13.83□□□□□ -0.2
PTP4A1Q93096 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
PTP4A1Q93096 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC13.83□□□□□ -0.2
PTP4A1Q93096 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC13.83□□□□□ -0.2
PTP4A1Q93096 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
PTP4A1Q93096 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC13.83□□□□□ -0.2
PTP4A1Q93096 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC13.83□□□□□ -0.2
PTP4A1Q93096 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC13.83□□□□□ -0.2
PTP4A1Q93096 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC13.83□□□□□ -0.2
PTP4A1Q93096 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC13.83□□□□□ -0.2
PTP4A1Q93096 MIR6069-201ENST00000620069 79 ntBASIC13.83□□□□□ -0.2
PTP4A1Q93096 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.2
PTP4A1Q93096 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC13.83□□□□□ -0.2
PTP4A1Q93096 AF228730.6-201ENST00000641497 218 ntBASIC13.83□□□□□ -0.2
PTP4A1Q93096 AC084121.3-201ENST00000641716 218 ntBASIC13.83□□□□□ -0.2
PTP4A1Q93096 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
PTP4A1Q93096 REXO1L4P-201ENST00000605109 1937 ntBASIC13.83□□□□□ -0.2
PTP4A1Q93096 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
PTP4A1Q93096 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
PTP4A1Q93096 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
PTP4A1Q93096 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
PTP4A1Q93096 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
PTP4A1Q93096 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
PTP4A1Q93096 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms