Protein–RNA interactions for Protein: Q8WXD2

SCG3, Secretogranin-3, humanhuman

Known RBP Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3Q8WXD2 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
SCG3Q8WXD2 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
SCG3Q8WXD2 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC15.83■□□□□ 0.13
SCG3Q8WXD2 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
SCG3Q8WXD2 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
SCG3Q8WXD2 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
SCG3Q8WXD2 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SCG3Q8WXD2 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SCG3Q8WXD2 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC15.83■□□□□ 0.12
SCG3Q8WXD2 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC15.83■□□□□ 0.12
SCG3Q8WXD2 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SCG3Q8WXD2 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
SCG3Q8WXD2 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
SCG3Q8WXD2 NME2-201ENST00000393183 568 ntTSL 2 BASIC15.83■□□□□ 0.12
SCG3Q8WXD2 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
SCG3Q8WXD2 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
SCG3Q8WXD2 OSM-203ENST00000403463 464 ntTSL 3 BASIC15.83■□□□□ 0.12
SCG3Q8WXD2 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
SCG3Q8WXD2 ELP6-209ENST00000446787 894 ntTSL 3 BASIC15.83■□□□□ 0.12
SCG3Q8WXD2 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC15.83■□□□□ 0.12
SCG3Q8WXD2 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC15.83■□□□□ 0.12
SCG3Q8WXD2 RN7SL692P-201ENST00000464677 288 ntBASIC15.83■□□□□ 0.12
SCG3Q8WXD2 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC15.83■□□□□ 0.12
SCG3Q8WXD2 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
SCG3Q8WXD2 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
SCG3Q8WXD2 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC15.83■□□□□ 0.12
SCG3Q8WXD2 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
SCG3Q8WXD2 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC15.83■□□□□ 0.12
SCG3Q8WXD2 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC15.83■□□□□ 0.12
SCG3Q8WXD2 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC15.83■□□□□ 0.12
SCG3Q8WXD2 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
SCG3Q8WXD2 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC15.83■□□□□ 0.12
SCG3Q8WXD2 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SCG3Q8WXD2 AC105250.1-201ENST00000509378 2057 ntBASIC15.83■□□□□ 0.12
SCG3Q8WXD2 PPP1R26P4-201ENST00000619065 3527 ntBASIC15.83■□□□□ 0.12
SCG3Q8WXD2 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
SCG3Q8WXD2 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
SCG3Q8WXD2 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SCG3Q8WXD2 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC15.83■□□□□ 0.12
SCG3Q8WXD2 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.12
SCG3Q8WXD2 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SCG3Q8WXD2 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC15.83■□□□□ 0.12
SCG3Q8WXD2 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC15.83■□□□□ 0.12
SCG3Q8WXD2 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SCG3Q8WXD2 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SCG3Q8WXD2 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SCG3Q8WXD2 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SCG3Q8WXD2 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SCG3Q8WXD2 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
SCG3Q8WXD2 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SCG3Q8WXD2 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
SCG3Q8WXD2 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
SCG3Q8WXD2 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
SCG3Q8WXD2 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
SCG3Q8WXD2 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SCG3Q8WXD2 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC15.82■□□□□ 0.12
SCG3Q8WXD2 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SCG3Q8WXD2 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
SCG3Q8WXD2 DFFBP1-201ENST00000433250 979 ntBASIC15.82■□□□□ 0.12
SCG3Q8WXD2 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC15.82■□□□□ 0.12
SCG3Q8WXD2 LINC01551-203ENST00000550266 455 ntTSL 3 BASIC15.82■□□□□ 0.12
SCG3Q8WXD2 AL596325.1-201ENST00000563991 1082 ntBASIC15.82■□□□□ 0.12
SCG3Q8WXD2 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
SCG3Q8WXD2 AL132655.2-201ENST00000596276 594 ntBASIC15.82■□□□□ 0.12
SCG3Q8WXD2 AC097359.3-201ENST00000603982 1210 ntBASIC15.82■□□□□ 0.12
SCG3Q8WXD2 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
SCG3Q8WXD2 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC15.82■□□□□ 0.12
SCG3Q8WXD2 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
SCG3Q8WXD2 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
SCG3Q8WXD2 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
SCG3Q8WXD2 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SCG3Q8WXD2 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SCG3Q8WXD2 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SCG3Q8WXD2 IMPDH1P4-201ENST00000445028 1534 ntBASIC15.82■□□□□ 0.12
SCG3Q8WXD2 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SCG3Q8WXD2 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
SCG3Q8WXD2 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC15.82■□□□□ 0.12
SCG3Q8WXD2 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SCG3Q8WXD2 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SCG3Q8WXD2 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SCG3Q8WXD2 LINC01101-201ENST00000622953 1884 ntBASIC15.82■□□□□ 0.12
SCG3Q8WXD2 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SCG3Q8WXD2 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC15.82■□□□□ 0.12
SCG3Q8WXD2 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC15.82■□□□□ 0.12
SCG3Q8WXD2 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC15.82■□□□□ 0.12
SCG3Q8WXD2 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SCG3Q8WXD2 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC15.82■□□□□ 0.12
SCG3Q8WXD2 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SCG3Q8WXD2 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
SCG3Q8WXD2 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC15.82■□□□□ 0.12
SCG3Q8WXD2 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC15.82■□□□□ 0.12
SCG3Q8WXD2 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
SCG3Q8WXD2 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
SCG3Q8WXD2 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC15.81■□□□□ 0.12
SCG3Q8WXD2 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC15.81■□□□□ 0.12
SCG3Q8WXD2 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SCG3Q8WXD2 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC15.81■□□□□ 0.12
SCG3Q8WXD2 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SCG3Q8WXD2 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SCG3Q8WXD2 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms