Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
RTN4IP1Q8WWV3 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
RTN4IP1Q8WWV3 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RTN4IP1Q8WWV3 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC13.01□□□□□ -0.33
RTN4IP1Q8WWV3 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RTN4IP1Q8WWV3 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
RTN4IP1Q8WWV3 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
RTN4IP1Q8WWV3 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC13.01□□□□□ -0.33
RTN4IP1Q8WWV3 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
RTN4IP1Q8WWV3 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RTN4IP1Q8WWV3 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RTN4IP1Q8WWV3 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC13.01□□□□□ -0.33
RTN4IP1Q8WWV3 TNN-203ENST00000622870 3719 ntTSL 5 BASIC13.01□□□□□ -0.33
RTN4IP1Q8WWV3 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RTN4IP1Q8WWV3 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
RTN4IP1Q8WWV3 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
RTN4IP1Q8WWV3 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
RTN4IP1Q8WWV3 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
RTN4IP1Q8WWV3 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
RTN4IP1Q8WWV3 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
RTN4IP1Q8WWV3 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
RTN4IP1Q8WWV3 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
RTN4IP1Q8WWV3 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC13□□□□□ -0.33
RTN4IP1Q8WWV3 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
RTN4IP1Q8WWV3 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC13□□□□□ -0.33
RTN4IP1Q8WWV3 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC13□□□□□ -0.33
RTN4IP1Q8WWV3 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC13□□□□□ -0.33
RTN4IP1Q8WWV3 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
RTN4IP1Q8WWV3 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC13□□□□□ -0.33
RTN4IP1Q8WWV3 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC13□□□□□ -0.33
RTN4IP1Q8WWV3 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC13□□□□□ -0.33
RTN4IP1Q8WWV3 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
RTN4IP1Q8WWV3 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
RTN4IP1Q8WWV3 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC13□□□□□ -0.33
RTN4IP1Q8WWV3 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
RTN4IP1Q8WWV3 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
RTN4IP1Q8WWV3 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
RTN4IP1Q8WWV3 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
RTN4IP1Q8WWV3 SPDYE7P-202ENST00000420373 878 ntBASIC13□□□□□ -0.33
RTN4IP1Q8WWV3 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC13□□□□□ -0.33
RTN4IP1Q8WWV3 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC13□□□□□ -0.33
RTN4IP1Q8WWV3 PHKG1P2-201ENST00000457537 863 ntBASIC13□□□□□ -0.33
RTN4IP1Q8WWV3 CCDC74BP1-201ENST00000508880 1123 ntBASIC13□□□□□ -0.33
RTN4IP1Q8WWV3 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC13□□□□□ -0.33
RTN4IP1Q8WWV3 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC13□□□□□ -0.33
RTN4IP1Q8WWV3 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
RTN4IP1Q8WWV3 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC13□□□□□ -0.33
RTN4IP1Q8WWV3 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC13□□□□□ -0.33
RTN4IP1Q8WWV3 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
RTN4IP1Q8WWV3 AC007967.4-201ENST00000614700 386 ntBASIC13□□□□□ -0.33
RTN4IP1Q8WWV3 MIR6080-201ENST00000617359 66 ntBASIC13□□□□□ -0.33
RTN4IP1Q8WWV3 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC13□□□□□ -0.33
RTN4IP1Q8WWV3 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
RTN4IP1Q8WWV3 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
RTN4IP1Q8WWV3 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
RTN4IP1Q8WWV3 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC13□□□□□ -0.33
RTN4IP1Q8WWV3 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
RTN4IP1Q8WWV3 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC13□□□□□ -0.33
RTN4IP1Q8WWV3 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC13□□□□□ -0.33
RTN4IP1Q8WWV3 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC13□□□□□ -0.33
RTN4IP1Q8WWV3 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC13□□□□□ -0.33
RTN4IP1Q8WWV3 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC13□□□□□ -0.33
RTN4IP1Q8WWV3 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
RTN4IP1Q8WWV3 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
RTN4IP1Q8WWV3 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC13□□□□□ -0.33
RTN4IP1Q8WWV3 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC13□□□□□ -0.33
RTN4IP1Q8WWV3 ABR-228ENST00000574437 3196 ntTSL 5 BASIC13□□□□□ -0.33
RTN4IP1Q8WWV3 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
RTN4IP1Q8WWV3 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
RTN4IP1Q8WWV3 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
RTN4IP1Q8WWV3 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
RTN4IP1Q8WWV3 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
RTN4IP1Q8WWV3 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
RTN4IP1Q8WWV3 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
RTN4IP1Q8WWV3 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
RTN4IP1Q8WWV3 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
RTN4IP1Q8WWV3 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
RTN4IP1Q8WWV3 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC12.99□□□□□ -0.33
RTN4IP1Q8WWV3 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
RTN4IP1Q8WWV3 AC015656.1-201ENST00000624209 3578 ntBASIC12.99□□□□□ -0.33
RTN4IP1Q8WWV3 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
RTN4IP1Q8WWV3 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
RTN4IP1Q8WWV3 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
RTN4IP1Q8WWV3 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
RTN4IP1Q8WWV3 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
RTN4IP1Q8WWV3 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC12.99□□□□□ -0.33
RTN4IP1Q8WWV3 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
RTN4IP1Q8WWV3 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
RTN4IP1Q8WWV3 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
RTN4IP1Q8WWV3 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
RTN4IP1Q8WWV3 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
RTN4IP1Q8WWV3 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
RTN4IP1Q8WWV3 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC12.99□□□□□ -0.33
RTN4IP1Q8WWV3 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC12.99□□□□□ -0.33
RTN4IP1Q8WWV3 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
RTN4IP1Q8WWV3 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC12.99□□□□□ -0.33
RTN4IP1Q8WWV3 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC12.99□□□□□ -0.33
RTN4IP1Q8WWV3 DAD1-205ENST00000543337 501 ntTSL 3 BASIC12.99□□□□□ -0.33
RTN4IP1Q8WWV3 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC12.99□□□□□ -0.33
RTN4IP1Q8WWV3 AC105021.1-202ENST00000570572 669 ntBASIC12.99□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms