Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
SHKBP1Q8TBC3 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC16.1■□□□□ 0.17
SHKBP1Q8TBC3 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC16.1■□□□□ 0.17
SHKBP1Q8TBC3 EMC4-209ENST00000559421 497 ntTSL 2 BASIC16.1■□□□□ 0.17
SHKBP1Q8TBC3 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC16.1■□□□□ 0.17
SHKBP1Q8TBC3 AC091271.1-201ENST00000611877 1162 ntBASIC16.1■□□□□ 0.17
SHKBP1Q8TBC3 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC16.1■□□□□ 0.17
SHKBP1Q8TBC3 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SHKBP1Q8TBC3 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SHKBP1Q8TBC3 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SHKBP1Q8TBC3 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SHKBP1Q8TBC3 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SHKBP1Q8TBC3 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC16.1■□□□□ 0.17
SHKBP1Q8TBC3 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SHKBP1Q8TBC3 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC16.1■□□□□ 0.17
SHKBP1Q8TBC3 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
SHKBP1Q8TBC3 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC16.1■□□□□ 0.17
SHKBP1Q8TBC3 AC112504.1-201ENST00000623415 1841 ntBASIC16.1■□□□□ 0.17
SHKBP1Q8TBC3 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SHKBP1Q8TBC3 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC16.1■□□□□ 0.17
SHKBP1Q8TBC3 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SHKBP1Q8TBC3 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SHKBP1Q8TBC3 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
SHKBP1Q8TBC3 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC16.1■□□□□ 0.17
SHKBP1Q8TBC3 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC16.09■□□□□ 0.17
SHKBP1Q8TBC3 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
SHKBP1Q8TBC3 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SHKBP1Q8TBC3 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SHKBP1Q8TBC3 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
SHKBP1Q8TBC3 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SHKBP1Q8TBC3 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
SHKBP1Q8TBC3 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
SHKBP1Q8TBC3 TKT-202ENST00000423516 2075 ntTSL 2 BASIC16.09■□□□□ 0.17
SHKBP1Q8TBC3 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SHKBP1Q8TBC3 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SHKBP1Q8TBC3 MIR326-201ENST00000362220 95 ntBASIC16.09■□□□□ 0.17
SHKBP1Q8TBC3 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SHKBP1Q8TBC3 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SHKBP1Q8TBC3 ACTBP8-201ENST00000403258 1108 ntBASIC16.09■□□□□ 0.17
SHKBP1Q8TBC3 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC16.09■□□□□ 0.17
SHKBP1Q8TBC3 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC16.09■□□□□ 0.17
SHKBP1Q8TBC3 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC16.09■□□□□ 0.17
SHKBP1Q8TBC3 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
SHKBP1Q8TBC3 PFN2-215ENST00000497148 743 ntTSL 4 BASIC16.09■□□□□ 0.17
SHKBP1Q8TBC3 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SHKBP1Q8TBC3 ZNF767P-206ENST00000513792 565 ntBASIC16.09■□□□□ 0.17
SHKBP1Q8TBC3 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC16.09■□□□□ 0.17
SHKBP1Q8TBC3 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC16.09■□□□□ 0.17
SHKBP1Q8TBC3 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
SHKBP1Q8TBC3 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC16.09■□□□□ 0.17
SHKBP1Q8TBC3 HNRNPA1P48-202ENST00000565308 961 ntBASIC16.09■□□□□ 0.17
SHKBP1Q8TBC3 AC243960.2-201ENST00000600996 747 ntBASIC16.09■□□□□ 0.17
SHKBP1Q8TBC3 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC16.09■□□□□ 0.17
SHKBP1Q8TBC3 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC16.09■□□□□ 0.17
SHKBP1Q8TBC3 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC16.09■□□□□ 0.17
SHKBP1Q8TBC3 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC16.09■□□□□ 0.17
SHKBP1Q8TBC3 ETV2-208ENST00000621247 941 ntTSL 5 BASIC16.09■□□□□ 0.17
SHKBP1Q8TBC3 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
SHKBP1Q8TBC3 AHCYP2-201ENST00000430630 1300 ntBASIC16.09■□□□□ 0.17
SHKBP1Q8TBC3 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
SHKBP1Q8TBC3 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC16.09■□□□□ 0.17
SHKBP1Q8TBC3 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
SHKBP1Q8TBC3 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SHKBP1Q8TBC3 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SHKBP1Q8TBC3 LCK-206ENST00000373564 2137 ntTSL 5 BASIC16.09■□□□□ 0.17
SHKBP1Q8TBC3 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SHKBP1Q8TBC3 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC16.09■□□□□ 0.17
SHKBP1Q8TBC3 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SHKBP1Q8TBC3 C1R-202ENST00000536053 2347 ntTSL 2 BASIC16.08■□□□□ 0.17
SHKBP1Q8TBC3 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.17
SHKBP1Q8TBC3 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.17
SHKBP1Q8TBC3 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
SHKBP1Q8TBC3 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
SHKBP1Q8TBC3 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC16.08■□□□□ 0.17
SHKBP1Q8TBC3 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
SHKBP1Q8TBC3 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.17
SHKBP1Q8TBC3 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
SHKBP1Q8TBC3 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC16.08■□□□□ 0.16
SHKBP1Q8TBC3 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
SHKBP1Q8TBC3 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
SHKBP1Q8TBC3 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC16.08■□□□□ 0.16
SHKBP1Q8TBC3 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC16.08■□□□□ 0.16
SHKBP1Q8TBC3 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SHKBP1Q8TBC3 NME6-203ENST00000415644 849 ntTSL 2 BASIC16.08■□□□□ 0.16
SHKBP1Q8TBC3 GOLGA2P4-201ENST00000441462 777 ntBASIC16.08■□□□□ 0.16
SHKBP1Q8TBC3 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
SHKBP1Q8TBC3 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC16.08■□□□□ 0.16
SHKBP1Q8TBC3 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC16.08■□□□□ 0.16
SHKBP1Q8TBC3 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
SHKBP1Q8TBC3 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SHKBP1Q8TBC3 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC16.08■□□□□ 0.16
SHKBP1Q8TBC3 RNA5SP486-201ENST00000515961 83 ntBASIC16.08■□□□□ 0.16
SHKBP1Q8TBC3 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC16.08■□□□□ 0.16
SHKBP1Q8TBC3 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SHKBP1Q8TBC3 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC16.08■□□□□ 0.16
SHKBP1Q8TBC3 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC16.08■□□□□ 0.16
SHKBP1Q8TBC3 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
SHKBP1Q8TBC3 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
SHKBP1Q8TBC3 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
SHKBP1Q8TBC3 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms