Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CPEB3Q8NE35 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CPEB3Q8NE35 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC13.48□□□□□ -0.25
CPEB3Q8NE35 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
CPEB3Q8NE35 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
CPEB3Q8NE35 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
CPEB3Q8NE35 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CPEB3Q8NE35 AL391825.1-201ENST00000457671 1364 ntBASIC13.47□□□□□ -0.25
CPEB3Q8NE35 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC13.47□□□□□ -0.25
CPEB3Q8NE35 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC13.47□□□□□ -0.25
CPEB3Q8NE35 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CPEB3Q8NE35 ZEB1-AS1-208ENST00000607166 2503 ntBASIC13.47□□□□□ -0.25
CPEB3Q8NE35 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC13.47□□□□□ -0.25
CPEB3Q8NE35 PCDHA3-202ENST00000532566 4594 ntBASIC13.47□□□□□ -0.25
CPEB3Q8NE35 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CPEB3Q8NE35 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CPEB3Q8NE35 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
CPEB3Q8NE35 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
CPEB3Q8NE35 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CPEB3Q8NE35 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CPEB3Q8NE35 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC13.47□□□□□ -0.25
CPEB3Q8NE35 CALY-202ENST00000368555 783 ntTSL 2 BASIC13.47□□□□□ -0.25
CPEB3Q8NE35 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
CPEB3Q8NE35 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC13.47□□□□□ -0.25
CPEB3Q8NE35 AC087499.6-201ENST00000411576 835 ntBASIC13.47□□□□□ -0.25
CPEB3Q8NE35 PIN1P1-201ENST00000412108 996 ntBASIC13.47□□□□□ -0.25
CPEB3Q8NE35 AC098850.1-201ENST00000419919 790 ntBASIC13.47□□□□□ -0.25
CPEB3Q8NE35 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC13.47□□□□□ -0.25
CPEB3Q8NE35 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CPEB3Q8NE35 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC13.47□□□□□ -0.25
CPEB3Q8NE35 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC13.47□□□□□ -0.25
CPEB3Q8NE35 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CPEB3Q8NE35 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC13.47□□□□□ -0.25
CPEB3Q8NE35 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC13.47□□□□□ -0.25
CPEB3Q8NE35 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC13.47□□□□□ -0.25
CPEB3Q8NE35 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC13.47□□□□□ -0.25
CPEB3Q8NE35 POLD4-211ENST00000539074 714 ntTSL 3 BASIC13.47□□□□□ -0.25
CPEB3Q8NE35 CDK4-206ENST00000549606 558 ntTSL 2 BASIC13.47□□□□□ -0.25
CPEB3Q8NE35 AC190387.1-201ENST00000551683 408 ntBASIC13.47□□□□□ -0.25
CPEB3Q8NE35 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC13.47□□□□□ -0.25
CPEB3Q8NE35 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC13.47□□□□□ -0.25
CPEB3Q8NE35 COX11-202ENST00000571584 1108 ntTSL 2 BASIC13.47□□□□□ -0.25
CPEB3Q8NE35 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC13.47□□□□□ -0.25
CPEB3Q8NE35 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC13.47□□□□□ -0.25
CPEB3Q8NE35 GPR39-203ENST00000622084 900 ntTSL 5 BASIC13.47□□□□□ -0.25
CPEB3Q8NE35 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CPEB3Q8NE35 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CPEB3Q8NE35 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CPEB3Q8NE35 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
CPEB3Q8NE35 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC13.47□□□□□ -0.25
CPEB3Q8NE35 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CPEB3Q8NE35 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC13.47□□□□□ -0.25
CPEB3Q8NE35 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CPEB3Q8NE35 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC13.47□□□□□ -0.25
CPEB3Q8NE35 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CPEB3Q8NE35 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC13.47□□□□□ -0.25
CPEB3Q8NE35 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CPEB3Q8NE35 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC13.47□□□□□ -0.25
CPEB3Q8NE35 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC13.47□□□□□ -0.25
CPEB3Q8NE35 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CPEB3Q8NE35 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CPEB3Q8NE35 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CPEB3Q8NE35 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CPEB3Q8NE35 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CPEB3Q8NE35 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC13.46□□□□□ -0.25
CPEB3Q8NE35 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC13.46□□□□□ -0.25
CPEB3Q8NE35 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CPEB3Q8NE35 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
CPEB3Q8NE35 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CPEB3Q8NE35 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CPEB3Q8NE35 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
CPEB3Q8NE35 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CPEB3Q8NE35 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CPEB3Q8NE35 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CPEB3Q8NE35 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC13.46□□□□□ -0.25
CPEB3Q8NE35 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
CPEB3Q8NE35 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC13.46□□□□□ -0.25
CPEB3Q8NE35 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CPEB3Q8NE35 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC13.46□□□□□ -0.25
CPEB3Q8NE35 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CPEB3Q8NE35 GAPDHP40-201ENST00000505218 1006 ntBASIC13.46□□□□□ -0.25
CPEB3Q8NE35 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC13.46□□□□□ -0.25
CPEB3Q8NE35 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC13.46□□□□□ -0.25
CPEB3Q8NE35 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC13.46□□□□□ -0.25
CPEB3Q8NE35 AL049840.4-201ENST00000602422 811 ntBASIC13.46□□□□□ -0.25
CPEB3Q8NE35 AC093726.1-201ENST00000608064 963 ntBASIC13.46□□□□□ -0.25
CPEB3Q8NE35 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC13.46□□□□□ -0.25
CPEB3Q8NE35 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC13.46□□□□□ -0.25
CPEB3Q8NE35 AL645728.2-202ENST00000641679 227 ntBASIC13.46□□□□□ -0.25
CPEB3Q8NE35 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CPEB3Q8NE35 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC13.46□□□□□ -0.25
CPEB3Q8NE35 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC13.46□□□□□ -0.25
CPEB3Q8NE35 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.25
CPEB3Q8NE35 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CPEB3Q8NE35 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
CPEB3Q8NE35 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC13.46□□□□□ -0.26
CPEB3Q8NE35 DRD5P1-201ENST00000456605 1438 ntBASIC13.46□□□□□ -0.26
CPEB3Q8NE35 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
CPEB3Q8NE35 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
CPEB3Q8NE35 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 70.9 ms