Protein–RNA interactions for Protein: Q8NBW4

SLC38A9, Sodium-coupled neutral amino acid transporter 9, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A9Q8NBW4 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SLC38A9Q8NBW4 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SLC38A9Q8NBW4 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC14.42□□□□□ -0.1
SLC38A9Q8NBW4 MST1L-201ENST00000442552 2185 ntBASIC14.41□□□□□ -0.1
SLC38A9Q8NBW4 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SLC38A9Q8NBW4 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SLC38A9Q8NBW4 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SLC38A9Q8NBW4 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC14.41□□□□□ -0.1
SLC38A9Q8NBW4 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
SLC38A9Q8NBW4 AL354989.2-201ENST00000435838 1540 ntBASIC14.41□□□□□ -0.1
SLC38A9Q8NBW4 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SLC38A9Q8NBW4 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SLC38A9Q8NBW4 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
SLC38A9Q8NBW4 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SLC38A9Q8NBW4 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SLC38A9Q8NBW4 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SLC38A9Q8NBW4 HLA-K-203ENST00000430151 1046 ntBASIC14.41□□□□□ -0.1
SLC38A9Q8NBW4 HOMER2P2-201ENST00000451621 847 ntBASIC14.41□□□□□ -0.1
SLC38A9Q8NBW4 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC14.41□□□□□ -0.1
SLC38A9Q8NBW4 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SLC38A9Q8NBW4 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC14.41□□□□□ -0.1
SLC38A9Q8NBW4 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC14.41□□□□□ -0.1
SLC38A9Q8NBW4 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC14.41□□□□□ -0.1
SLC38A9Q8NBW4 EMC4-209ENST00000559421 497 ntTSL 2 BASIC14.41□□□□□ -0.1
SLC38A9Q8NBW4 C2orf69P2-201ENST00000562032 1123 ntBASIC14.41□□□□□ -0.1
SLC38A9Q8NBW4 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SLC38A9Q8NBW4 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC14.41□□□□□ -0.1
SLC38A9Q8NBW4 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC14.41□□□□□ -0.1
SLC38A9Q8NBW4 KLK3-211ENST00000597483 810 ntTSL 2 BASIC14.41□□□□□ -0.1
SLC38A9Q8NBW4 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SLC38A9Q8NBW4 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
SLC38A9Q8NBW4 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
SLC38A9Q8NBW4 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC14.41□□□□□ -0.1
SLC38A9Q8NBW4 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
SLC38A9Q8NBW4 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SLC38A9Q8NBW4 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC14.41□□□□□ -0.1
SLC38A9Q8NBW4 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SLC38A9Q8NBW4 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
SLC38A9Q8NBW4 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
SLC38A9Q8NBW4 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SLC38A9Q8NBW4 SLC9A7P1-202ENST00000556476 2239 ntBASIC14.41□□□□□ -0.1
SLC38A9Q8NBW4 BID-213ENST00000615414 2236 ntTSL 5 BASIC14.41□□□□□ -0.1
SLC38A9Q8NBW4 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SLC38A9Q8NBW4 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SLC38A9Q8NBW4 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SLC38A9Q8NBW4 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SLC38A9Q8NBW4 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SLC38A9Q8NBW4 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SLC38A9Q8NBW4 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC14.41□□□□□ -0.1
SLC38A9Q8NBW4 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
SLC38A9Q8NBW4 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
SLC38A9Q8NBW4 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SLC38A9Q8NBW4 AGK-211ENST00000629555 2765 ntTSL 5 BASIC14.4□□□□□ -0.1
SLC38A9Q8NBW4 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC14.4□□□□□ -0.1
SLC38A9Q8NBW4 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
SLC38A9Q8NBW4 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SLC38A9Q8NBW4 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
SLC38A9Q8NBW4 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SLC38A9Q8NBW4 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
SLC38A9Q8NBW4 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SLC38A9Q8NBW4 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SLC38A9Q8NBW4 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC14.4□□□□□ -0.1
SLC38A9Q8NBW4 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SLC38A9Q8NBW4 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SLC38A9Q8NBW4 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
SLC38A9Q8NBW4 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
SLC38A9Q8NBW4 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
SLC38A9Q8NBW4 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
SLC38A9Q8NBW4 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC14.4□□□□□ -0.1
SLC38A9Q8NBW4 Z93015.1-201ENST00000451718 390 ntBASIC14.4□□□□□ -0.1
SLC38A9Q8NBW4 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SLC38A9Q8NBW4 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SLC38A9Q8NBW4 AC022616.1-201ENST00000518688 554 ntBASIC14.4□□□□□ -0.1
SLC38A9Q8NBW4 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC14.4□□□□□ -0.1
SLC38A9Q8NBW4 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC14.4□□□□□ -0.1
SLC38A9Q8NBW4 AL118558.3-201ENST00000607414 1079 ntBASIC14.4□□□□□ -0.1
SLC38A9Q8NBW4 AC244093.1-201ENST00000610837 814 ntBASIC14.4□□□□□ -0.1
SLC38A9Q8NBW4 ABBA01031663.1-201ENST00000635630 790 ntBASIC14.4□□□□□ -0.1
SLC38A9Q8NBW4 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SLC38A9Q8NBW4 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
SLC38A9Q8NBW4 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SLC38A9Q8NBW4 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC14.4□□□□□ -0.1
SLC38A9Q8NBW4 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SLC38A9Q8NBW4 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SLC38A9Q8NBW4 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC14.4□□□□□ -0.1
SLC38A9Q8NBW4 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SLC38A9Q8NBW4 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SLC38A9Q8NBW4 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SLC38A9Q8NBW4 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SLC38A9Q8NBW4 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SLC38A9Q8NBW4 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SLC38A9Q8NBW4 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SLC38A9Q8NBW4 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC14.39□□□□□ -0.11
SLC38A9Q8NBW4 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
SLC38A9Q8NBW4 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC14.39□□□□□ -0.11
SLC38A9Q8NBW4 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
SLC38A9Q8NBW4 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC14.39□□□□□ -0.11
SLC38A9Q8NBW4 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SLC38A9Q8NBW4 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SLC38A9Q8NBW4 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 59 ms