Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CCDC116Q8IYX3 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC14.53□□□□□ -0.08
CCDC116Q8IYX3 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC14.53□□□□□ -0.08
CCDC116Q8IYX3 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CCDC116Q8IYX3 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
CCDC116Q8IYX3 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
CCDC116Q8IYX3 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC14.53□□□□□ -0.08
CCDC116Q8IYX3 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC14.53□□□□□ -0.08
CCDC116Q8IYX3 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CCDC116Q8IYX3 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
CCDC116Q8IYX3 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CCDC116Q8IYX3 WASH3P-207ENST00000560956 1394 ntBASIC14.53□□□□□ -0.08
CCDC116Q8IYX3 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC14.53□□□□□ -0.08
CCDC116Q8IYX3 OSM-203ENST00000403463 464 ntTSL 3 BASIC14.53□□□□□ -0.08
CCDC116Q8IYX3 RAC2-204ENST00000406508 893 ntTSL 5 BASIC14.53□□□□□ -0.08
CCDC116Q8IYX3 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
CCDC116Q8IYX3 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CCDC116Q8IYX3 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC14.53□□□□□ -0.08
CCDC116Q8IYX3 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC14.53□□□□□ -0.08
CCDC116Q8IYX3 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC14.53□□□□□ -0.08
CCDC116Q8IYX3 TMPRSS11CP-201ENST00000453277 683 ntBASIC14.53□□□□□ -0.08
CCDC116Q8IYX3 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC14.53□□□□□ -0.08
CCDC116Q8IYX3 AL139317.3-201ENST00000555969 898 ntTSL 2 BASIC14.53□□□□□ -0.08
CCDC116Q8IYX3 RARRES2P5-201ENST00000564013 466 ntBASIC14.53□□□□□ -0.08
CCDC116Q8IYX3 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC14.53□□□□□ -0.08
CCDC116Q8IYX3 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC14.53□□□□□ -0.08
CCDC116Q8IYX3 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
CCDC116Q8IYX3 AL359258.3-201ENST00000622910 2331 ntBASIC14.53□□□□□ -0.08
CCDC116Q8IYX3 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
CCDC116Q8IYX3 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CCDC116Q8IYX3 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CCDC116Q8IYX3 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CCDC116Q8IYX3 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC14.53□□□□□ -0.08
CCDC116Q8IYX3 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
CCDC116Q8IYX3 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CCDC116Q8IYX3 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CCDC116Q8IYX3 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CCDC116Q8IYX3 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
CCDC116Q8IYX3 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
CCDC116Q8IYX3 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CCDC116Q8IYX3 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CCDC116Q8IYX3 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CCDC116Q8IYX3 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
CCDC116Q8IYX3 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
CCDC116Q8IYX3 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CCDC116Q8IYX3 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CCDC116Q8IYX3 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
CCDC116Q8IYX3 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CCDC116Q8IYX3 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
CCDC116Q8IYX3 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CCDC116Q8IYX3 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.08
CCDC116Q8IYX3 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CCDC116Q8IYX3 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CCDC116Q8IYX3 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC14.52□□□□□ -0.09
CCDC116Q8IYX3 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
CCDC116Q8IYX3 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC14.52□□□□□ -0.09
CCDC116Q8IYX3 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CCDC116Q8IYX3 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CCDC116Q8IYX3 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC14.52□□□□□ -0.09
CCDC116Q8IYX3 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC14.52□□□□□ -0.09
CCDC116Q8IYX3 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC14.52□□□□□ -0.09
CCDC116Q8IYX3 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC14.52□□□□□ -0.09
CCDC116Q8IYX3 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CCDC116Q8IYX3 GPR39-203ENST00000622084 900 ntTSL 5 BASIC14.52□□□□□ -0.09
CCDC116Q8IYX3 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CCDC116Q8IYX3 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
CCDC116Q8IYX3 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CCDC116Q8IYX3 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
CCDC116Q8IYX3 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CCDC116Q8IYX3 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC14.52□□□□□ -0.09
CCDC116Q8IYX3 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC14.52□□□□□ -0.09
CCDC116Q8IYX3 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
CCDC116Q8IYX3 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.09
CCDC116Q8IYX3 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CCDC116Q8IYX3 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC14.52□□□□□ -0.09
CCDC116Q8IYX3 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CCDC116Q8IYX3 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CCDC116Q8IYX3 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
CCDC116Q8IYX3 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC14.52□□□□□ -0.09
CCDC116Q8IYX3 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CCDC116Q8IYX3 SULT1A1-211ENST00000569554 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CCDC116Q8IYX3 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
CCDC116Q8IYX3 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC14.51□□□□□ -0.09
CCDC116Q8IYX3 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
CCDC116Q8IYX3 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
CCDC116Q8IYX3 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
CCDC116Q8IYX3 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC14.51□□□□□ -0.09
CCDC116Q8IYX3 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC14.51□□□□□ -0.09
CCDC116Q8IYX3 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CCDC116Q8IYX3 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC14.51□□□□□ -0.09
CCDC116Q8IYX3 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
CCDC116Q8IYX3 ZBED1P1-201ENST00000502364 1930 ntBASIC14.51□□□□□ -0.09
CCDC116Q8IYX3 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC14.51□□□□□ -0.09
CCDC116Q8IYX3 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
CCDC116Q8IYX3 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CCDC116Q8IYX3 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CCDC116Q8IYX3 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CCDC116Q8IYX3 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CCDC116Q8IYX3 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC14.51□□□□□ -0.09
CCDC116Q8IYX3 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms