Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 NCK2-206ENST00000522586 490 ntTSL 5 BASIC15.18■□□□□ 0.02
TMEFF1Q8IYR6 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
TMEFF1Q8IYR6 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
TMEFF1Q8IYR6 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC15.18■□□□□ 0.02
TMEFF1Q8IYR6 AC091544.8-201ENST00000619490 361 ntBASIC15.18■□□□□ 0.02
TMEFF1Q8IYR6 AP001002.3-201ENST00000623482 206 ntBASIC15.18■□□□□ 0.02
TMEFF1Q8IYR6 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TMEFF1Q8IYR6 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC15.18■□□□□ 0.02
TMEFF1Q8IYR6 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TMEFF1Q8IYR6 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC15.18■□□□□ 0.02
TMEFF1Q8IYR6 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC15.18■□□□□ 0.02
TMEFF1Q8IYR6 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC15.18■□□□□ 0.02
TMEFF1Q8IYR6 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC15.18■□□□□ 0.02
TMEFF1Q8IYR6 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TMEFF1Q8IYR6 AC132872.4-202ENST00000622924 2756 ntBASIC15.18■□□□□ 0.02
TMEFF1Q8IYR6 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TMEFF1Q8IYR6 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TMEFF1Q8IYR6 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TMEFF1Q8IYR6 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TMEFF1Q8IYR6 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC15.17■□□□□ 0.02
TMEFF1Q8IYR6 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TMEFF1Q8IYR6 AC069224.1-201ENST00000566372 1715 ntBASIC15.17■□□□□ 0.02
TMEFF1Q8IYR6 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TMEFF1Q8IYR6 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TMEFF1Q8IYR6 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
TMEFF1Q8IYR6 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC15.17■□□□□ 0.02
TMEFF1Q8IYR6 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TMEFF1Q8IYR6 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TMEFF1Q8IYR6 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TMEFF1Q8IYR6 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TMEFF1Q8IYR6 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
TMEFF1Q8IYR6 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
TMEFF1Q8IYR6 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TMEFF1Q8IYR6 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TMEFF1Q8IYR6 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TMEFF1Q8IYR6 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TMEFF1Q8IYR6 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TMEFF1Q8IYR6 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC15.17■□□□□ 0.02
TMEFF1Q8IYR6 HLA-DQB2-229ENST00000411527 1059 ntBASIC15.17■□□□□ 0.02
TMEFF1Q8IYR6 POM121L8P-201ENST00000417732 1281 ntBASIC15.17■□□□□ 0.02
TMEFF1Q8IYR6 RGS5-214ENST00000429865 754 ntTSL 3 BASIC15.17■□□□□ 0.02
TMEFF1Q8IYR6 POM121L9P-203ENST00000441984 1285 ntBASIC15.17■□□□□ 0.02
TMEFF1Q8IYR6 HIST2H2BB-201ENST00000449108 381 ntBASIC15.17■□□□□ 0.02
TMEFF1Q8IYR6 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TMEFF1Q8IYR6 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC15.17■□□□□ 0.02
TMEFF1Q8IYR6 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC15.17■□□□□ 0.02
TMEFF1Q8IYR6 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC15.17■□□□□ 0.02
TMEFF1Q8IYR6 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC15.17■□□□□ 0.02
TMEFF1Q8IYR6 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC15.17■□□□□ 0.02
TMEFF1Q8IYR6 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TMEFF1Q8IYR6 ZACNP1-201ENST00000612259 710 ntBASIC15.17■□□□□ 0.02
TMEFF1Q8IYR6 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
TMEFF1Q8IYR6 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
TMEFF1Q8IYR6 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC15.17■□□□□ 0.02
TMEFF1Q8IYR6 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC15.17■□□□□ 0.02
TMEFF1Q8IYR6 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
TMEFF1Q8IYR6 AGK-211ENST00000629555 2765 ntTSL 5 BASIC15.17■□□□□ 0.02
TMEFF1Q8IYR6 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TMEFF1Q8IYR6 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TMEFF1Q8IYR6 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC15.17■□□□□ 0.02
TMEFF1Q8IYR6 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC15.17■□□□□ 0.02
TMEFF1Q8IYR6 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
TMEFF1Q8IYR6 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC15.16■□□□□ 0.02
TMEFF1Q8IYR6 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TMEFF1Q8IYR6 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TMEFF1Q8IYR6 FUK-207ENST00000571514 3054 ntTSL 2 BASIC15.16■□□□□ 0.02
TMEFF1Q8IYR6 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
TMEFF1Q8IYR6 FER1L4-210ENST00000615531 5998 ntBASIC15.16■□□□□ 0.02
TMEFF1Q8IYR6 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
TMEFF1Q8IYR6 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TMEFF1Q8IYR6 AC112504.1-201ENST00000623415 1841 ntBASIC15.16■□□□□ 0.02
TMEFF1Q8IYR6 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TMEFF1Q8IYR6 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC15.16■□□□□ 0.02
TMEFF1Q8IYR6 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TMEFF1Q8IYR6 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TMEFF1Q8IYR6 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
TMEFF1Q8IYR6 LSM5-207ENST00000410044 687 ntTSL 3 BASIC15.16■□□□□ 0.02
TMEFF1Q8IYR6 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC15.16■□□□□ 0.02
TMEFF1Q8IYR6 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC15.16■□□□□ 0.02
TMEFF1Q8IYR6 PTPA-217ENST00000434095 870 ntTSL 2 BASIC15.16■□□□□ 0.02
TMEFF1Q8IYR6 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
TMEFF1Q8IYR6 AC021723.1-201ENST00000486306 515 ntBASIC15.16■□□□□ 0.02
TMEFF1Q8IYR6 AC100850.1-201ENST00000506768 649 ntBASIC15.16■□□□□ 0.02
TMEFF1Q8IYR6 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC15.16■□□□□ 0.02
TMEFF1Q8IYR6 AC005740.2-201ENST00000511085 419 ntBASIC15.16■□□□□ 0.02
TMEFF1Q8IYR6 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC15.16■□□□□ 0.02
TMEFF1Q8IYR6 MIR4722-201ENST00000578292 60 ntBASIC15.16■□□□□ 0.02
TMEFF1Q8IYR6 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC15.16■□□□□ 0.02
TMEFF1Q8IYR6 U62317.3-201ENST00000608319 855 ntBASIC15.16■□□□□ 0.02
TMEFF1Q8IYR6 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC15.16■□□□□ 0.02
TMEFF1Q8IYR6 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC15.16■□□□□ 0.02
TMEFF1Q8IYR6 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TMEFF1Q8IYR6 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TMEFF1Q8IYR6 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TMEFF1Q8IYR6 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TMEFF1Q8IYR6 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
TMEFF1Q8IYR6 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
TMEFF1Q8IYR6 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TMEFF1Q8IYR6 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TMEFF1Q8IYR6 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms