Protein–RNA interactions for Protein: Q8IWV7

UBR1, E3 ubiquitin-protein ligase UBR1, humanhuman

Predictions only

Length 1,749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1Q8IWV7 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC21.1■□□□□ 0.97
UBR1Q8IWV7 SLC25A21-203ENST00000555449 1023 ntAPPRIS ALT1 TSL 2 BASIC21.1■□□□□ 0.97
UBR1Q8IWV7 AP005131.2-201ENST00000589045 487 ntTSL 2 BASIC21.1■□□□□ 0.97
UBR1Q8IWV7 AC242426.4-201ENST00000606856 573 ntTSL 5 BASIC21.1■□□□□ 0.97
UBR1Q8IWV7 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC21.1■□□□□ 0.97
UBR1Q8IWV7 PCDHB19P-201ENST00000570871 2371 ntBASIC21.1■□□□□ 0.97
UBR1Q8IWV7 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
UBR1Q8IWV7 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
UBR1Q8IWV7 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
UBR1Q8IWV7 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
UBR1Q8IWV7 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
UBR1Q8IWV7 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC21.1■□□□□ 0.97
UBR1Q8IWV7 AP000845.1-201ENST00000581677 2131 ntBASIC21.1■□□□□ 0.97
UBR1Q8IWV7 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
UBR1Q8IWV7 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC21.1■□□□□ 0.97
UBR1Q8IWV7 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
UBR1Q8IWV7 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
UBR1Q8IWV7 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
UBR1Q8IWV7 RHEB-207ENST00000496004 744 ntTSL 2 BASIC21.09■□□□□ 0.97
UBR1Q8IWV7 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC21.09■□□□□ 0.97
UBR1Q8IWV7 RPS23-204ENST00000507980 836 ntTSL 2 BASIC21.09■□□□□ 0.97
UBR1Q8IWV7 C8orf31-207ENST00000524181 1199 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
UBR1Q8IWV7 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC21.09■□□□□ 0.97
UBR1Q8IWV7 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
UBR1Q8IWV7 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
UBR1Q8IWV7 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC21.09■□□□□ 0.97
UBR1Q8IWV7 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC21.09■□□□□ 0.97
UBR1Q8IWV7 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
UBR1Q8IWV7 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
UBR1Q8IWV7 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
UBR1Q8IWV7 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
UBR1Q8IWV7 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
UBR1Q8IWV7 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC21.09■□□□□ 0.97
UBR1Q8IWV7 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
UBR1Q8IWV7 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC21.09■□□□□ 0.97
UBR1Q8IWV7 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC21.09■□□□□ 0.97
UBR1Q8IWV7 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
UBR1Q8IWV7 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
UBR1Q8IWV7 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC21.09■□□□□ 0.97
UBR1Q8IWV7 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC21.09■□□□□ 0.97
UBR1Q8IWV7 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
UBR1Q8IWV7 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
UBR1Q8IWV7 OBSCN-AS1-201ENST00000295012 889 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
UBR1Q8IWV7 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
UBR1Q8IWV7 GCSHP3-201ENST00000431120 391 ntBASIC21.09■□□□□ 0.97
UBR1Q8IWV7 AC084752.1-201ENST00000509766 622 ntBASIC21.09■□□□□ 0.97
UBR1Q8IWV7 AC012213.1-201ENST00000517376 722 ntTSL 3 BASIC21.09■□□□□ 0.97
UBR1Q8IWV7 AC012158.2-201ENST00000536546 354 ntBASIC21.09■□□□□ 0.97
UBR1Q8IWV7 AC015917.2-201ENST00000580714 493 ntTSL 3 BASIC21.09■□□□□ 0.97
UBR1Q8IWV7 AC020934.2-201ENST00000592400 456 ntTSL 3 BASIC21.09■□□□□ 0.97
UBR1Q8IWV7 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC21.09■□□□□ 0.97
UBR1Q8IWV7 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
UBR1Q8IWV7 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
UBR1Q8IWV7 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
UBR1Q8IWV7 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
UBR1Q8IWV7 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
UBR1Q8IWV7 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
UBR1Q8IWV7 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC21.08■□□□□ 0.97
UBR1Q8IWV7 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC21.08■□□□□ 0.97
UBR1Q8IWV7 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC21.08■□□□□ 0.97
UBR1Q8IWV7 AC005332.8-201ENST00000622750 2735 ntBASIC21.08■□□□□ 0.97
UBR1Q8IWV7 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
UBR1Q8IWV7 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
UBR1Q8IWV7 BAK1P1-201ENST00000317045 636 ntBASIC21.08■□□□□ 0.97
UBR1Q8IWV7 OR2V1-201ENST00000329365 948 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
UBR1Q8IWV7 FAM3B-201ENST00000357985 1088 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
UBR1Q8IWV7 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC21.08■□□□□ 0.97
UBR1Q8IWV7 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
UBR1Q8IWV7 MDH2-205ENST00000461263 648 ntTSL 2 BASIC21.08■□□□□ 0.97
UBR1Q8IWV7 AP003398.1-201ENST00000531124 318 ntBASIC21.08■□□□□ 0.97
UBR1Q8IWV7 AC027139.1-201ENST00000565286 951 ntBASIC21.08■□□□□ 0.97
UBR1Q8IWV7 UXT-AS1-202ENST00000591832 565 ntTSL 4 BASIC21.08■□□□□ 0.97
UBR1Q8IWV7 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC21.08■□□□□ 0.97
UBR1Q8IWV7 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
UBR1Q8IWV7 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC21.08■□□□□ 0.97
UBR1Q8IWV7 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
UBR1Q8IWV7 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
UBR1Q8IWV7 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
UBR1Q8IWV7 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
UBR1Q8IWV7 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
UBR1Q8IWV7 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC21.08■□□□□ 0.96
UBR1Q8IWV7 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
UBR1Q8IWV7 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
UBR1Q8IWV7 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
UBR1Q8IWV7 MMP7-201ENST00000260227 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
UBR1Q8IWV7 LCE3B-201ENST00000335633 288 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
UBR1Q8IWV7 AC019118.2-201ENST00000425776 718 ntTSL 5 BASIC21.07■□□□□ 0.96
UBR1Q8IWV7 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC21.07■□□□□ 0.96
UBR1Q8IWV7 MIA-206ENST00000597784 455 ntAPPRIS P1 TSL 3 BASIC21.07■□□□□ 0.96
UBR1Q8IWV7 ZNF530-203ENST00000597864 634 ntTSL 2 BASIC21.07■□□□□ 0.96
UBR1Q8IWV7 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC21.07■□□□□ 0.96
UBR1Q8IWV7 AC012073.1-201ENST00000606114 1108 ntBASIC21.07■□□□□ 0.96
UBR1Q8IWV7 HTR4-213ENST00000631296 1224 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
UBR1Q8IWV7 TTC23L-209ENST00000638320 1185 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
UBR1Q8IWV7 KRT33A-201ENST00000007735 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
UBR1Q8IWV7 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
UBR1Q8IWV7 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC21.07■□□□□ 0.96
UBR1Q8IWV7 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC21.07■□□□□ 0.96
UBR1Q8IWV7 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
UBR1Q8IWV7 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 376.7 ms